Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00741 and BPUM_0400

See DNA alignment / Visit BSNT_00741 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:31
# Commandline: needle
#    -asequence pep-align/BSNT_00741___topB.1.24716.seq
#    -bsequence pep-align/BPUM_0400___topB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00741___topB-BPUM_0400___topB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00741___topB-BPUM_0400___topB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00741___topB
# 2: BPUM_0400___topB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 729
# Identity:     575/729 (78.9%)
# Similarity:   648/729 (88.9%)
# Gaps:           3/729 ( 0.4%)
# Score: 2999.0
# 
#
#=======================================

BSNT_00741___      1 MSKTVVLAEKPSVGRDLARVLKCHKKGNGYLEGDQYIVTWALGHLVTLAD     50
                     |||||||||||||||||||||||||||||:||||||||||||||||||||
BPUM_0400___t      1 MSKTVVLAEKPSVGRDLARVLKCHKKGNGFLEGDQYIVTWALGHLVTLAD     50

BSNT_00741___     51 PEGYGKEFQSWRLEDLPIIPEPLKLVVIKKTGKQFNAVKSQLTRKDVNQI    100
                     |||||||||||||||||||||||||||:|||||||.|||:||.||||..|
BPUM_0400___t     51 PEGYGKEFQSWRLEDLPIIPEPLKLVVMKKTGKQFQAVKAQLARKDVKDI    100

BSNT_00741___    101 VIATDAGREGELVARWIIEKANVRKPIKRLWISSVTDKAIKEGFQKLRSG    150
                     |||||||||||||||||:|||:|:||:|||||||||||||:|||::|:.|
BPUM_0400___t    101 VIATDAGREGELVARWILEKAHVKKPLKRLWISSVTDKAIQEGFKRLKDG    150

BSNT_00741___    151 KEYENLYHSAVARAEADWIVGINATRALTTKFNAQLSCGRVQTPTLAMIA    200
                     |||:|||.|||||||||||||||||||||||||||||||||||||:|||.
BPUM_0400___t    151 KEYDNLYRSAVARAEADWIVGINATRALTTKFNAQLSCGRVQTPTIAMIF    200

BSNT_00741___    201 KREADIQAFTPVPYYGIRAVVDGMTLTWQDKKSKQTRTFNQDVTSRLLKN    250
                     |||.|||.|.|.|:||:.|.|||:||||||.|:||.|||.::|....|..
BPUM_0400___t    201 KREEDIQQFQPKPFYGLTAQVDGLTLTWQDAKTKQNRTFQENVIKERLAA    250

BSNT_00741___    251 LQGKQAVVAELKKTAKKSFAPALYDLTELQRDAHKRFGFSAKETLSVLQK    300
                     .:||.|||..|||||||:|||.||||||||||||||:|||||||||.||:
BPUM_0400___t    251 CKGKPAVVDALKKTAKKAFAPGLYDLTELQRDAHKRYGFSAKETLSTLQR    300

BSNT_00741___    301 LYEQHKLVTYPRTDSRFLSSDIIPTLKDRLEGMEVKPYAQYVSQIKKRGI    350
                     |||||||||||||||||:|:||:|||||||:||.|:||||:|::|.:.|:
BPUM_0400___t    301 LYEQHKLVTYPRTDSRFISADIVPTLKDRLKGMNVRPYAQHVNRILQSGV    350

BSNT_00741___    351 KSHKGYVNDAKVSDHHAIIPTEEPLVLSSLSDKERKLYDLIAKRFLAVLM    400
                     |:|||:|||||||||||||||||.|....|||||||||||||||||||||
BPUM_0400___t    351 KAHKGFVNDAKVSDHHAIIPTEEELYPGVLSDKERKLYDLIAKRFLAVLM    400

BSNT_00741___    401 PAFEYEETKVIAEIGGETFRAKGKTVQSQGWKAVYDMADEDDEQEDDRDQ    450
                     ..||||||.||.:||.|||.|||||||:.|||||||.:.|::|.. :.||
BPUM_0400___t    401 NPFEYEETTVITKIGSETFTAKGKTVQAAGWKAVYDDSYEEEESA-EADQ    449

BSNT_00741___    451 TLPALQKGDTLAVRTLTETSGQTKPPARFNEGTLLSAMENPSAFMQGEEK    500
                     .||.|.:|.:|.||.|.||.|:|||||||||.|||||||||:||||.|||
BPUM_0400___t    450 HLPLLSEGQSLDVRQLKETRGETKPPARFNEATLLSAMENPAAFMQNEEK    499

BSNT_00741___    501 GLVKTLGETGGLGTVATRADIIEKLFNSFLIEKKGQDIFITSKGKQLLQL    550
                     .||||||||||||||||||||||||||||||||||:||||||||||||.|
BPUM_0400___t    500 DLVKTLGETGGLGTVATRADIIEKLFNSFLIEKKGKDIFITSKGKQLLSL    549

BSNT_00741___    551 VPEDLKSPALTAEWEQKLSAIAAGKLKSAVFIKDMKAYAHQTVKEIKNSS    600
                     |||||||||||||||||||.||.|:||::.|:.:||:||.|.|.|||.::
BPUM_0400___t    550 VPEDLKSPALTAEWEQKLSKIAKGQLKASQFMSEMKSYAKQAVSEIKQTN    599

BSNT_00741___    601 QTFRHDNITGTACPECGKMMLKVNGKRGTMLVCQDRECGSRKTIARKTNA    650
                     |||:|||:|||.||:|||:|||||||.||||||||||||.||.:|:||||
BPUM_0400___t    600 QTFKHDNVTGTHCPDCGKLMLKVNGKHGTMLVCQDRECGHRKNVAKKTNA    649

BSNT_00741___    651 RCPNCHKRMELRGQGEGQTFACVCGHREKLSVFEKRKNK-DKARATKRDV    699
                     |||||||::||||:|:|:.||||||||||||||||||:: ::.:|:|.||
BPUM_0400___t    650 RCPNCHKKLELRGEGDGKIFACVCGHREKLSVFEKRKSQSNQKKASKHDV    699

BSNT_00741___    700 SSYMKKQNK-DEPINNALAEQLKKLGLDK    727
                     |.|||||.| :||||||||||||||.||:
BPUM_0400___t    700 SKYMKKQKKVEEPINNALAEQLKKLKLDQ    728


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