Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00944 and BPUM_0487
See
DNA alignment /
Visit
BSNT_00944 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:37
# Commandline: needle
# -asequence pep-align/BSNT_00944___ydfN.1.24716.seq
# -bsequence pep-align/BPUM_0487.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00944___ydfN-BPUM_0487.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00944___ydfN-BPUM_0487.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00944___ydfN
# 2: BPUM_0487
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity: 130/218 (59.6%)
# Similarity: 169/218 (77.5%)
# Gaps: 12/218 ( 5.5%)
# Score: 691.0
#
#
#=======================================
BSNT_00944___ 1 ------------MAEFIQLVNERRSASNFLSGHPITKEDLNEMFDLVALA 38
...|..||.|||||||||....|::|:||.:|:.|.:|
BPUM_0487 1 MRNNFTKRGNKMTLSFETLVRERRSASNFLPNISISREELNSIFEEVKMA 50
BSNT_00944___ 39 PSAFNLQHTKYVAVLDQDVKEKLKQAANGQYKVVSSSAVLLVLGDKQAYQ 88
|||||||||:||.|..:.:||::::||.|||||.|:||.::||||.:|||
BPUM_0487 51 PSAFNLQHTQYVVVQTEGLKEQVREAAFGQYKVHSASAAIIVLGDPKAYQ 100
BSNT_00944___ 89 QAADIYEGLKVLGILNKQEYDHMVQDTVSFYENRGEQFKRDEAIRNASLS 138
||.:||||||:|||||||:|:.||::|:||||.||..|:::|||||||||
BPUM_0487 101 QAGNIYEGLKMLGILNKQQYEEMVRETMSFYEKRGADFQKEEAIRNASLS 150
BSNT_00944___ 139 AMMFMLSAKEKGWDTCPMIGFDAEAVKRILNIDDQFEVVMMITIGKEKTE 188
||:|||:||.||||||||||||.:.:|::|||:.....|:|||:||||.|
BPUM_0487 151 AMLFMLAAKNKGWDTCPMIGFDPDVMKKVLNIESDLVPVLMITLGKEKVE 200
BSNT_00944___ 189 SRRPRGYRKPVNEFVEYM 206
||:.|||||||:|||.|:
BPUM_0487 201 SRQARGYRKPVSEFVTYL 218
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.