Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01043 and BPUM_0530

See DNA alignment / Visit BSNT_01043 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:41
# Commandline: needle
#    -asequence pep-align/BSNT_01043___tatCY.1.24716.seq
#    -bsequence pep-align/BPUM_0530___tatCY.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01043___tatCY-BPUM_0530___tatCY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01043___tatCY-BPUM_0530___tatCY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01043___tatCY
# 2: BPUM_0530___tatCY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     183/254 (72.0%)
# Similarity:   221/254 (87.0%)
# Gaps:           3/254 ( 1.2%)
# Score: 984.0
# 
#
#=======================================

BSNT_01043___      1 ---MKVNQMSLLEHIAELRKRLLIVALAFVVFFIAGFFLAKPIIVYLQET     47
                        |.|..|.|:|||.||||||:::|:.||.|.:||||||||:|||||.|
BPUM_0530___t      1 MSFMNVKDMPLMEHIVELRKRLVVIAMFFVAFMVAGFFLAKPVIVYLQNT     50

BSNT_01043___     48 DEAKQLTLNAFNLTDPLYVFMQFAFIIGIVLTSPVILYQLWAFVSPGLYE     97
                     |||..||||||.|||||||||||||:|.:|||.||||||||||||||||:
BPUM_0530___t     51 DEAATLTLNAFKLTDPLYVFMQFAFVIALVLTCPVILYQLWAFVSPGLYD    100

BSNT_01043___     98 KERKVTLSYIPISILLFLAGLSFSYYILFPFVVDFMKRISQDLNVNQVIG    147
                     |||||||:||||::||||:|::|||:||||||||||.|:|.||||.||||
BPUM_0530___t    101 KERKVTLAYIPIALLLFLSGVAFSYFILFPFVVDFMIRMSNDLNVEQVIG    150

BSNT_01043___    148 INEYFHFLLQLTIPFGLLFQMPVILMFLTRLGIVTPMFLAKIRKYAYFTL    197
                     |:|||.||:|||:|||.||||||:|||||||||:|||||:||||||||.|
BPUM_0530___t    151 IHEYFTFLMQLTLPFGFLFQMPVVLMFLTRLGIITPMFLSKIRKYAYFVL    200

BSNT_01043___    198 LVIAALITPPELLSHMMVTVPLLILYEISILISKAAYRKAQKSSAADQDV    247
                     |||||||||||::||:|||:|:|:|||:||:||:..|||.|::...:::.
BPUM_0530___t    201 LVIAALITPPEIVSHLMVTLPMLVLYEVSIVISRVTYRKMQQTETGEKEN    250

BSNT_01043___    248 SSVQ    251
                     ..|.
BPUM_0530___t    251 DDVS    254


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