Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01088 and BPUM_0546
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:42
# Commandline: needle
# -asequence pep-align/BSNT_01088.1.24716.seq
# -bsequence pep-align/BPUM_0546___yeaD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01088-BPUM_0546___yeaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01088-BPUM_0546___yeaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01088
# 2: BPUM_0546___yeaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 412
# Identity: 159/412 (38.6%)
# Similarity: 235/412 (57.0%)
# Gaps: 30/412 ( 7.3%)
# Score: 698.5
#
#
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BSNT_01088 1 --MNKKWQ---WLVYGWKLIILTLLTAAVFSYAMFQGGFVSWFLFYTFLP 45
:..::. || ::::|.:||||||.|||||||||||||||.|||
BPUM_0546___y 1 MKLGHRFAFSLWL----RVMMLIILTAAVFCYAMFQGGFVSWFLFYAFLP 46
BSNT_01088 46 FVLYAGLLALYPLRSFQASRQMDKTQLHAGDRLGVTVTLRRKLPFPLMYM 95
:.|||.|.||.||| ..|.|.:.:|:|.|||.|.|.:.::|..|||.:|:
BPUM_0546___y 47 YALYALLFALVPLR-VTAKRTLQQTRLKAGDVLSVDLEIKRTNPFPYVYV 95
BSNT_01088 96 VIEDCLPEGIESLNRDGAAAKRLVFPWFKRSMTMSYELARVPRGEHHFHS 145
:|||..|:.... ::....|:::||||:::...||:|..|.|||||..:
BPUM_0546___y 96 LIEDDPPDTFHL--KEQIEMKQMLFPWFRKTWRFSYQLNDVMRGEHHLSA 143
BSNT_01088 146 VRVRTGDVLGLIEKTTFFELDDTLFVYPFYQRFSYQVNERHQEDGVSGSS 195
||::|||:.|.:||.....|:..|.||| :....|| |..:....:|..
BPUM_0546___y 144 VRIKTGDMFGFVEKEVIIPLEKKLLVYP--KMLDLQV-ESAESVNENGGK 190
BSNT_01088 196 PIH---QHHSSVAASVRNYQPGDRFAALDWKTSARRSQLMTKEFEPSRSK 242
.:| ...:.|...||.||.|||||.:||||:|||.||||||||.:::|
BPUM_0546___y 191 AVHSWLNEPTHVTTGVREYQQGDRFAWVDWKTTARRGQLMTKEFEQNQTK 240
BSNT_01088 243 NLFLLMDRFSSDAFEEVVSVTASILYSVLKNGAGAGLASIGKEKNIFPIQ 292
:|.:..|.....|||.|||:|||:|.|.:|.|..|||..:| ::::|.:.
BPUM_0546___y 241 DLVVFADFTDEAAFETVVSITASVLQSAVKKGVPAGLVPLG-DQHVFRVD 289
BSNT_01088 293 EGDQHFKHMLRHLAIA--HCDAADPISRYAREELGKPSVRQADQVVVTGQ 340
:|:.|.:.:|..|.:. |...|.....:|..| .:.|.:.||||.
BPUM_0546___y 290 QGESHLQDLLYFLTMVQHHPSRALECKAFAASE-----YQYAGKYVVTGH 334
BSNT_01088 341 LTEDMLHLAEIGGGR--VTVILAKEKDAELSQAENAMIERMMKRQIRVRV 388
|.|::.....:...| :||:|.|......:..|..:::|:....:|..|
BPUM_0546___y 335 LHEELAESLFVNRNRKNITVLLVKRAADRYTTKEKQLVDRLKASGMRTTV 384
BSNT_01088 389 MRGGRV-SRVV- 398
:...|: .|.|
BPUM_0546___y 385 LFEDRLHERTVR 396
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