Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00834 and BPUM_0552

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:35
# Commandline: needle
#    -asequence pep-align/BSNT_00834.1.24716.seq
#    -bsequence pep-align/BPUM_0552.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00834-BPUM_0552.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00834-BPUM_0552.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00834
# 2: BPUM_0552
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 96
# Identity:      41/96 (42.7%)
# Similarity:    57/96 (59.4%)
# Gaps:          16/96 (16.7%)
# Score: 210.0
# 
#
#=======================================

BSNT_00834         1 MLQRSKISNGVIFINIDITNSFMKEAVPLARQMEGDWIARMKIALNSVII     50
                                  :.::.|.:.||:||.||:|:||:|.||||:|||.|.|
BPUM_0552          1 -------------MVLEDTKNVMKKAVSLAKQLEGNWTARMKMALNKVYI     37

BSNT_00834        51 NHYLNLPLTIENVNELLRKGVSYRRICKHYGIGRKDIEKLRQSSIV     96
                     .|||:.|||.|.:..||.||:|:|||.|||.:|.::|..|...   
BPUM_0552         38 EHYLSQPLTREVIERLLLKGMSFRRIKKHYNVGMQEISSLLAK---     80


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