Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00855 and BPUM_0575

See DNA alignment / Visit BSNT_00855 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:36
# Commandline: needle
#    -asequence pep-align/BSNT_00855.1.24716.seq
#    -bsequence pep-align/BPUM_0575___yddG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00855-BPUM_0575___yddG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00855-BPUM_0575___yddG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00855
# 2: BPUM_0575___yddG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 852
# Identity:     318/852 (37.3%)
# Similarity:   478/852 (56.1%)
# Gaps:          98/852 (11.5%)
# Score: 1396.0
# 
#
#=======================================

BSNT_00855         1 MKKKRILIVSAIVLLFLTVASAVTVFSAD--GDXTTQPKVEKAGGVELKV     48
                      .|||.||::.:.|:.| |:|...||:.|  || |.:||:||.|||:|::
BPUM_0575___y      1 -MKKRNLIITFLALVML-VSSVTLVFADDKEGDKTVKPKIEKVGGVDLEI     48

BSNT_00855        49 KRFPISRYQANNEASDDLIKGAFVGLTNVTFSFAGNIVRVVDAGMDILYN     98
                     .|||:..|||:|:|.|.:||||.|.|:||.......||.|||..||:..:
BPUM_0575___y     49 SRFPLEHYQAHNQAEDGMIKGAIVSLSNVMLGTTQIIVLVVDKAMDLFMS     98

BSNT_00855        99 LQPIDEFANSITNVSKTVYKTLKKNFGEALFIFTCAYVVYLFCVRGSIKE    148
                     .:||:.|:::||:|||.:|..|||:|||.:|:|...::||||.:||:.||
BPUM_0575___y     99 AEPINNFSDAITSVSKDMYNVLKKSFGEIIFVFLIGFLVYLFFIRGNFKE    148

BSNT_00855       149 AMRRSILFICVMVIGGLWMSNAGYYMKALNALSVEAQGKLLTAGNGLVGI    198
                     .|||..||..||::.|||::.|||::::|||||:|.||||:|.||.||..
BPUM_0575___y    149 GMRRFALFFLVMIVAGLWVNKAGYWVESLNALSIEGQGKLITVGNKLVDS    198

BSNT_00855       199 VRDEGNFADSS----GIEKGKEMEGTVAVMRNLYFDIALMKPFLIVNFDE    244
                     ...:   .|||    .::||:|::||.||:||.|||.||..|:|:.|:..
BPUM_0575___y    199 FSGK---TDSSLSMDDVKKGQELKGTTAVLRNFYFDAALKSPYLVTNYGT    245

BSNT_00855       245 TSEKKINEKDTDKGGLNRIDKLLSYKLSEDGEKDKKDYIKETEIDEYKNE    294
                     .:||||.:|...:|||:|||.|||:||:.:|:..||.:|.:.|:.||||:
BPUM_0575___y    246 PNEKKILKKGDGEGGLDRIDTLLSFKLNSEGQSAKKKFINDKEVKEYKNQ    295

BSNT_00855       295 SMTSGNVFNQLGESFIAVVASIVIGIPFLALAFFNFLLQVVALVIVFFVP    344
                     |:..|:::.|||.|||.::|:|.:|:||..:.|.|||:|::.|.|..|:|
BPUM_0575___y    296 SIAEGSIYAQLGYSFIGLLAAISLGVPFFLIPFLNFLIQIIVLAIALFLP    345

BSNT_00855       345 FAFILAYVPQLAYSGFVTLGRLGSVYLLKAMLGIIVLFVYVTCFIVDKLI    394
                     .||||:||||.||||||:|||:.:::::||||..:::|||..|.|.:|.|
BPUM_0575___y    346 MAFILSYVPQFAYSGFVSLGRMLALFVMKAMLTFVLIFVYAICVITNKTI    395

BSNT_00855       395 PPNGFGMYLLNVAVLASILWIGFHKRDAIIKFVTAGKVVSVDNNMMENMR    444
                     ||...|||.||||.:::||.:.|.|||.||||||||||.|||.|::||.|
BPUM_0575___y    396 PPTNLGMYFLNVAAISAILIVSFLKRDKIIKFVTAGKVQSVDANLLENTR    445

BSNT_00855       445 QNIVQPAWEQAKKIG---GVWGNGGGVFTDFTKHFGGRKDGSNADGVTGA    491
                     :.:|||:||.|||:.   |.|..              ::|.:||......
BPUM_0575___y    446 KQVVQPSWEGAKKVSSGIGEWKK--------------KRDAANASAEQSL    481

BSNT_00855       492 PSGGGNSPSGAAMGYDNTHAISRTPQKETANGIASHNSRNLKRNPQTLSK    541
                     .....::|...::|   ...|.||.|.....|.|: ..:.|:|..|..:.
BPUM_0575___y    482 GDNKRSAPHNQSVG---DSKIDRTSQNNPIKGDAA-AKKELERKRQLAAS    527

BSNT_00855       542 EQEKQKQKEAFANAKDNKQQSHLDRLRKDGINSPMLKDALNEGNEDLSKR    591
                     .|..::.|:   |...:.....:|..|.:.:....||:. .:.|...|..
BPUM_0575___y    528 NQLAEENKD---NTDASNVMPKVDVERSEQLTKDQLKEE-GDSNTSASNV    573

BSNT_00855       592 APILQDKKDESARTDQ-KE-----YVEQLLKQPDNQKQTDDASLQLEEET    635
                     .|.:..::.|....|| ||     ....::.:.|.::....|..||:||.
BPUM_0575___y    574 MPKVDVERSEQLAKDQLKEEGDSNSASNVMPKVDVERSEQLAKDQLKEEG    623

BSNT_00855       636 TSNRAPVLQESEKETERTDQKA---YVHEGQNQ-NTETEKHHDFEVQKDD    681
                     .||.:......:.:.||.:|.|   ...||.|. |..:......:|::.|
BPUM_0575___y    624 DSNTSASNVIPKVDVERNEQLAKDQLKEEGDNNTNAASNAIPKVDVERSD    673

BSNT_00855       682 SVSKSEPVAQEKT-----------AEIKRSDQ----KVMTNQSEPQLGFE    716
                     .: |.....:|||           .:::||||    |.:|.::.......
BPUM_0575___y    674 QI-KEHIAEEEKTNSPKGSTSIHEVDVERSDQGISEKTLTEENISNQNSV    722

BSNT_00855       717 SPQSTKVENQSIANNER-----KIRPSEPAKVHSDGIRVEEKQAVAPAES    761
                     ||    |.|.::|.||:     |:..|.| |..::.::..:.||      
BPUM_0575___y    723 SP----VPNTNVARNEQRQSEEKVSASVP-KTENETVKTSDTQA------    761

BSNT_00855       762 KTVSREKQPSSQNIKRTEQSVNTFDQVSLNEIARRSSSKVEDRLRRDERK    811
                     ||....:||....|:        .||:.    :|:|.:...||.      
BPUM_0575___y    762 KTKRVIQQPKHVKIE--------LDQIE----SRQSKNGRGDRS------    793

BSNT_00855       812 TL    813
                       
BPUM_0575___y    793 --    793


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_00855 and BPUM_0575

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
