Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00858 and BPUM_0576

See DNA alignment / Visit BSNT_00858 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:36
# Commandline: needle
#    -asequence pep-align/BSNT_00858___yddH.1.24716.seq
#    -bsequence pep-align/BPUM_0576___yddH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00858___yddH-BPUM_0576___yddH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00858___yddH-BPUM_0576___yddH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00858___yddH
# 2: BPUM_0576___yddH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 331
# Identity:     229/331 (69.2%)
# Similarity:   268/331 (81.0%)
# Gaps:           8/331 ( 2.4%)
# Score: 1202.5
# 
#
#=======================================

BSNT_00858___      1 MIKRKYLLSMIFSA-PFIFFFVLSILVVMTISRENQVGDDFIGGGDGEYE     49
                        .|.||:..||: |.|||.|:.::||:.....||  .:.|||||.|:.
BPUM_0576___y      1 ---MKKLLTAFFSSLPIIFFGVMLLIVVLIFGGSNQ--KEEIGGGDEEFV     45

BSNT_00858___     50 TVGIAPEVERFRAVFEKYARQEGVFDQVNIIMALTMQESGGRSLDIMQSS     99
                     |.|||||:||.|.|||||||:|||:||:||||||||||||||.|||||||
BPUM_0576___y     46 TNGIAPEIERLRHVFEKYARKEGVYDQLNIIMALTMQESGGRYLDIMQSS     95

BSNT_00858___    100 ESIGLPPNSITDPERSIEVGIKHFKKVFKQAGGDVRLTLQAYNFGSGFID    149
                     ||||||||:||:||.||:||||||..|:|:||||||||||:||:|.||||
BPUM_0576___y     96 ESIGLPPNTITNPEYSIQVGIKHFAAVYKKAGGDVRLTLQSYNYGGGFID    145

BSNT_00858___    150 YVKKNGGKYTKKLALDFSRLQAFKMGWKSYGDPSYVDHVMRYVKGSDKNV    199
                     :|||.||||||.|||:||:.||.|:||:|||||:|||:|.||:||.. :|
BPUM_0576___y    146 FVKKRGGKYTKALALEFSKFQALKLGWRSYGDPNYVDNVFRYLKGGG-SV    194

BSNT_00858___    200 KPVNGSMDFYETVMKEALKYEGQPYAWXGSNPKTGFDCSGLVXWSFAKAG    249
                     |||||:::.||.:|.|||||||.||.| ||.|.||||||||| |::.|||
BPUM_0576___y    195 KPVNGAVEGYEVIMNEALKYEGNPYQWAGSTPDTGFDCSGLVQWAYRKAG    244

BSNT_00858___    250 ITLPRTAXEQHXATKKISEKEATAGDLVFFXGTXEGKAITHVXIYVGXGR    299
                     |:||||| ||: |||||:|.||.||||||| || :||.|||| |||| ||
BPUM_0576___y    245 ISLPRTAQEQYGATKKIAESEAVAGDLVFFTGTYQGKFITHVGIYVGEGR    294

BSNT_00858___    300 MFNXNDSGXEYSDLKSGYWRXHLVSFGRIK-    329
                     ||| |||| :||.||.|||| ||||||||| 
BPUM_0576___y    295 MFNSNDSGVQYSQLKKGYWRDHLVSFGRIKR    325


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