Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00414 and BPUM_0583

See DNA alignment / Visit BSNT_00414 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:17
# Commandline: needle
#    -asequence pep-align/BSNT_00414___ybfP.1.24716.seq
#    -bsequence pep-align/BPUM_0583___ybfP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00414___ybfP-BPUM_0583___ybfP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00414___ybfP-BPUM_0583___ybfP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00414___ybfP
# 2: BPUM_0583___ybfP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     140/300 (46.7%)
# Similarity:   198/300 (66.0%)
# Gaps:          10/300 ( 3.3%)
# Score: 751.5
# 
#
#=======================================

BSNT_00414___      1 ---MYYEKAVQKTINWIESHLHEQISNEDIVNVSSFSKFHFHRIFQKEVG     47
                        ..:||.:|:|:|:||.||.:.:..:.:...:.:|:|||||||:|.:.
BPUM_0583___y      1 MSYQEHEKTIQETLNYIEQHLKDDLPLQTLAKHAGYSRFHFHRIFKKVIK     50

BSNT_00414___     48 MSVASYIRLRRLANAAAALLYTDHRIIDIALYYQFESQEAFTRTFKKMYH     97
                     .||..|:|.||:..||..|::||.|.||||..|:|.|||:|||.|||:|.
BPUM_0583___y     51 KSVVDYLRERRMTQAAKDLIHTDQRAIDIAFQYRFSSQESFTRAFKKIYD    100

BSNT_00414___     98 MPPGAYRTFMKRFTSKKEESYMEKK--MKGWVLSGSHPFQFEMGIDRENV    145
                     |.|..||..::...:::|.:..:.:  ..||:::|..|..:|.|:|.:.|
BPUM_0583___y    101 MSPARYRKLLRNVINEEETNMADHQNTPTGWIMTGDAPSDYETGLDNKIV    150

BSNT_00414___    146 HQGKASGYLKSTMVQDIGEFATMMQQFKADRYLGKRLRLSSFIKTKGVQH    195
                     |.|..|.|||| ..:..|.|||:|||.|::||.|:||:.|:|:|::.||.
BPUM_0583___y    151 HSGTNSAYLKS-KDKKAGGFATLMQQIKSERYKGERLQFSAFVKSEDVQG    199

BSNT_00414___    196 FASLWMRVDSAADDVLQFDNMSNRPITGTTNWNHYAIVLDVPENSAVISF    245
                     .|.||||:|.::.::|.||||.|||||||..|||:::|||||..|.||:|
BPUM_0583___y    200 SAGLWMRIDHSSGEILAFDNMMNRPITGTNGWNHFSVVLDVPVKSEVIAF    249

BSNT_00414___    246 GVQLSGPGQVWMDHVVFEEVDESVPSTNLEMPGELLDEPVNLSFEEELQK    295
                     ||.|.|||.:|||.:.|:.||||||.|.......|.||||||:||.    
BPUM_0583___y    250 GVLLQGPGHIWMDELSFKIVDESVPVTEQNTVDHLEDEPVNLNFEG----    295


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