Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01302 and BPUM_0729

See DNA alignment / Visit BSNT_01302 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:53
# Commandline: needle
#    -asequence pep-align/BSNT_01302___treA.1.24716.seq
#    -bsequence pep-align/BPUM_0729___treA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01302___treA-BPUM_0729___treA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01302___treA-BPUM_0729___treA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01302___treA
# 2: BPUM_0729___treA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 570
# Identity:     379/570 (66.5%)
# Similarity:   458/570 (80.4%)
# Gaps:          13/570 ( 2.3%)
# Score: 2116.0
# 
#
#=======================================

BSNT_01302___      1 MKTEQT--PWWKKAVVYQIYPKSFNDTTGNGVGDLNGIIEKLDYLKTLQV     48
                     || :||  ||||||||||||||||.||||:|.||:||:.:||||:|.|..
BPUM_0729___t      1 MK-QQTNEPWWKKAVVYQIYPKSFLDTTGSGTGDINGVTKKLDYIKELGA     49

BSNT_01302___     49 DVLWLTPIYDSPQHDNGYDIRDYYSIYPEYGTMEDFERLVSEAHKRDLKV     98
                     |.:||||:|:||||||||||.||..|:..||||.|||.::.|||.|.::|
BPUM_0729___t     50 DCIWLTPMYESPQHDNGYDISDYTKIHDMYGTMADFEHMLKEAHDRGIRV     99

BSNT_01302___     99 VMDLVVNHTSTEHKWFREAISSIDSPYRDFYIWKDPQENGSVPTNWESKF    148
                     :|||.|||||..||||:.:..|.|:||||:||||:|:.:||.|.:|:|||
BPUM_0729___t    100 IMDLAVNHTSIFHKWFQASRESKDNPYRDYYIWKEPKADGSPPNDWQSKF    149

BSNT_01302___    149 GGSAWELDEASGQYYLHLFDVTQADLNWENEEVRKHVYDMMHFWFEKGID    198
                     ||.||||||.:|:|||||:||||||||||.:|||:.|||:||||||||||
BPUM_0729___t    150 GGPAWELDEVTGEYYLHLYDVTQADLNWEKDEVRRQVYDIMHFWFEKGID    199

BSNT_01302___    199 GFRLDVINLISKDQRF----PNAEEGDGRSFYTDGPRVHEFLHEMNEKVF    244
                     ||||||||.|||||||    ..:.:||||.:||||||:||||||||::||
BPUM_0729___t    200 GFRLDVINNISKDQRFLDDAGQSVQGDGRMYYTDGPRIHEFLHEMNQEVF    249

BSNT_01302___    245 SHYDSMTVGEMSSTTVDHCIRYTNPDNKELDMTFSFHHLKVDYPNGEKWA    294
                     |.||||||||||||.:..|||||.||.:||||||:|||||||||||||||
BPUM_0729___t    250 SKYDSMTVGEMSSTNIADCIRYTRPDRQELDMTFNFHHLKVDYPNGEKWA    299

BSNT_01302___    295 LAPFDFLKLKEILSDWQTGMHAGGGWNALFWCNHDQPRVVSRYGDDGAYR    344
                     :|||||.:||.|||:|||.||.||||||||||||||||:|||||||..|.
BPUM_0729___t    300 IAPFDFHELKSILSEWQTKMHEGGGWNALFWCNHDQPRIVSRYGDDETYH    349

BSNT_01302___    345 VKSAKMLATAIHLMQGTPYIYQGEELGMTNPKFTDISSYRDVESLNMYHA    394
                     .:|||||||.|||||||||||||||:||.||:|.||.||||:||||||.|
BPUM_0729___t    350 QQSAKMLATTIHLMQGTPYIYQGEEIGMKNPQFEDILSYRDIESLNMYEA    399

BSNT_01302___    395 FKEKGMADQDITAILQAKSRDNSRTPVQWDATENGGFTTGTPWIPVAGNY    444
                     ..|||.:.::..||||.|||||:|||:||.:.:|.||:.|||||..|.| 
BPUM_0729___t    400 MLEKGKSKEEALAILQVKSRDNARTPMQWTSEKNAGFSKGTPWIEPANN-    448

BSNT_01302___    445 REINAEAALRDQNSVFYHYQKLIQIRKMYDIVTEGTYEIIAKDDPNIFAY    494
                      :|:.||:|:|:.|:|||||.|.::||..|::|.|::.::..|||.:|||
BPUM_0729___t    449 -DISVEASLKDKTSIFYHYQALCKLRKELDVITYGSFTLLLADDPKVFAY    497

BSNT_01302___    495 LRHGSNEKLLVINNFYGTEAAFTLPDSL--APDEWKAEVLLTN-DEAREG    541
                     :|....|||||||:||..|..|||||.|  |.||.:.:|||:| ::|.|.
BPUM_0729___t    498 VRESGEEKLLVINHFYAGETDFTLPDELVQAVDEMEGQVLLSNYEDAPED    547

BSNT_01302___    542 LQNMTLRPYESIVYRLMKPC    561
                     ::..||||||||||.|.|. 
BPUM_0729___t    548 MKGFTLRPYESIVYHLTKR-    566


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01302 and BPUM_0729

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
