Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05208 and BPUM_0773
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence pep-align/BSNT_05208___yvdT.1.24716.seq
# -bsequence pep-align/BPUM_0773.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05208___yvdT-BPUM_0773.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05208___yvdT-BPUM_0773.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05208___yvdT
# 2: BPUM_0773
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity: 79/246 (32.1%)
# Similarity: 122/246 (49.6%)
# Gaps: 57/246 (23.2%)
# Score: 380.0
#
#
#=======================================
BSNT_05208___ 1 -------------------------------------------------M 1
|
BPUM_0773 1 MLDPIYSLFRPARIYSSLILLFNDEKPILTNRHFLDKLTDIQSFKVGDDM 50
BSNT_05208___ 2 PKQTSGKYEKILQAAIEVISEKGLDKASISDIVKKAGTAQGTFYLYFSSK 51
.|: |||:.|||:...|||::|.:||||||.||.||||:||||.||
BPUM_0773 51 SKR-----EKIMLAAIDAFKEKGIEKTTISDIVKAAGVAQGTYYLYFPSK 95
BSNT_05208___ 52 NALIPAIAENLLTHTLDQIKGRLHGDEDFWTVLDILIDETFLITERHKDI 101
.:::|||||:|::..:..|:..|....|.....|.|::..|..|.:::|:
BPUM_0773 96 LSVMPAIAEHLISQMVPAIEKELTQHADVLDQADALVEFIFSFTRQYRDV 145
BSNT_05208___ 102 IVLCYSGLAIDHSMEKWETIYQPYYSWLEQIINKAIANHEVTEGINSKWT 151
:.|.|||||....:::||.||:|.|:|:...:.||..:..|...:|.::.
BPUM_0773 146 LALTYSGLAATEHLKEWEDIYEPIYNWVAAFLEKAKQDKRVRANLNCQYA 195
BSNT_05208___ 152 ARTIINLVENTAERFYIGFEQD-ENVEVYKKEIFTFLKRSLGTA-- 194
|:.||.|:|::||:.|:..|.| |.|.:.|:|:..||..:||..
BPUM_0773 196 AKFIIGLLESSAEQMYLFTETDTEEVLIQKREVKQFLLYALGIETS 241
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