Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00761 and BPUM_1228

See DNA alignment / Visit BSNT_00761 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:32
# Commandline: needle
#    -asequence pep-align/BSNT_00761___ydbB.1.24716.seq
#    -bsequence pep-align/BPUM_1228.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00761___ydbB-BPUM_1228.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00761___ydbB-BPUM_1228.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00761___ydbB
# 2: BPUM_1228
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 141
# Identity:      37/141 (26.2%)
# Similarity:    61/141 (43.3%)
# Gaps:          46/141 (32.6%)
# Score: 150.0
# 
#
#=======================================

BSNT_00761___      1 MSKMQNLLAIANEVKEKHA------NFSIS-EVNDHCVRLAVFTGEYDWH     43
                           :::..| ::||.:      |..|| |:||..:::....||:.||
BPUM_1228          1 ------MISKVN-IQEKFSQINDYWNPRISGELNDSYMKMVKIKGEFIWH     43

BSNT_00761___     44 HHPDSDELFIVLEGELLIDFKDKETAVLKTNDSLLIPKGTVHRTRSYVRT     93
                     ||.|.||:|.|.:|.|:|.|:|:|.| |...:.|:||||..|:.      
BPUM_1228         44 HHDDEDEMFFVWKGNLVIRFRDREIA-LHEGEFLVIPKGIEHQP------     86

BSNT_00761___     94 VNLCVEHKQAETVIIEEQPC---------------------    113
                         |..::...::||.:..                     
BPUM_1228         87 ----VAEEEVHLLLIEPKTTLNTGNVVNERTVSLPERMDER    123


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