Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02320 and BPUM_1275
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:47
# Commandline: needle
# -asequence pep-align/BSNT_02320___ykvW.1.24716.seq
# -bsequence pep-align/BPUM_1275___ykvW.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02320___ykvW-BPUM_1275___ykvW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02320___ykvW-BPUM_1275___ykvW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02320___ykvW
# 2: BPUM_1275___ykvW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 645
# Identity: 429/645 (66.5%)
# Similarity: 526/645 (81.6%)
# Gaps: 14/645 ( 2.2%)
# Score: 2181.5
#
#
#=======================================
BSNT_02320___ 1 MNEQVIVQRDPHEPLKTDKREK-----NWAQHAELIAALVSGALILAGWL 45
|||...:.: .|:::|. .||||.|||||.::|.|||.||:
BPUM_1275___y 1 MNENAALDQ------TTNQKESKWSLHQWAQHGELIAAGIAGILILIGWM 44
BSNT_02320___ 46 LSGYQVLSIILFLLAFVIGGFAKAKEGIEETLESKTLNVELLMIFAAVGS 95
|....:.||.||:|||:||||||||||||||:.||:|||||||||||:||
BPUM_1275___y 45 LKDETMWSIPLFILAFIIGGFAKAKEGIEETISSKSLNVELLMIFAAIGS 94
BSNT_02320___ 96 ALIGYWAEGAILIFIFSLSGALETYTMNKSSRDLTSLMQLEPEEATLM-V 144
|:||||||||||||||||||||||||.|||.:|||:||.:.|:||||: .
BPUM_1275___y 95 AIIGYWAEGAILIFIFSLSGALETYTSNKSKKDLTALMSIAPDEATLIEE 144
BSNT_02320___ 145 NGETKRVPVSDLQAGDMIVIKPGERVAADGIIESGSTSLDESALTGESMP 194
:|.|.::..|.|..||.|:||.|||:||||:|.||.||:|||||||||:|
BPUM_1275___y 145 DGTTIQIAASSLTPGDRIMIKAGERIAADGVILSGRTSVDESALTGESVP 194
BSNT_02320___ 195 VEKNRGDAVFTGTVNRNGSLTVRVTKANEDSLFRKIIKLVESAQNSVSPA 244
.||.:|:.||.||||.||||||.|||.||::||.||||||||||.||||:
BPUM_1275___y 195 QEKGQGEDVFAGTVNLNGSLTVEVTKHNEETLFHKIIKLVESAQESVSPS 244
BSNT_02320___ 245 QAFIERFENAYVKGVLIAVALLLFVPHFALGWSWSETFYRAMVFMVVASP 294
|||||:||.||||||||.||:|:.:|||.||||.||||||||||||||||
BPUM_1275___y 245 QAFIEKFEGAYVKGVLITVAILMVLPHFVLGWSMSETFYRAMVFMVVASP 294
BSNT_02320___ 295 CALVASIMPAALSLISNGARNGMLVKGSVFLEQLGSVQMIAFDKTGTVTK 344
||||||||||||||||||||||||||||||||:||:..|||||||||:|.
BPUM_1275___y 295 CALVASIMPAALSLISNGARNGMLVKGSVFLEKLGTSSMIAFDKTGTITS 344
BSNT_02320___ 345 GQPAVETIRIAEGFSEAEVLEAVYAIEMQSSHPLAQAITAYAESRGVNQS 394
|:||||.:.||:|..||...:|:|.||.||:||||:||:..|:.:.:.::
BPUM_1275___y 345 GKPAVEQVLIAKGQEEAAFYQALYQIESQSNHPLAKAISDMAQEQQIERT 394
BSNT_02320___ 395 GYISIEETSGFGVMAEVSGAKWKVGKAGFIGEEMAAQFLKQTASDVIQSG 444
.:::|||||||||.|:::|..|::||..|.|:......:::....:.:.|
BPUM_1275___y 395 AHVTIEETSGFGVKAQLNGETWRIGKKDFAGKAPMDSEIEEAGEQLSEKG 444
BSNT_02320___ 445 HTIVFVKKDDQIAGCIALKDQIRPEAKEVMEELNRLGIKTAMLTGDHEDT 494
:|:|:|:||..:.||:.||||||||||::::|||.|||:|.|||||.:.|
BPUM_1275___y 445 YTVVYVQKDQVVVGCLGLKDQIRPEAKKMIQELNDLGIQTVMLTGDQQKT 494
BSNT_02320___ 495 AQAIAKEAGMTTVVAECLPDQKVNEIKRLKEEFGTIAMVGDGINDAPALK 544
|:|||:|||:.|||||||||:||:|:.:||::..:|.||||||||||||.
BPUM_1275___y 495 AEAIAQEAGIQTVVAECLPDEKVHEVNQLKKQGNSIIMVGDGINDAPALA 544
BSNT_02320___ 545 AADVGIAMGGGTDVALETADMVLMKNDLKKLVNMCRLSRKMNRIIKQNIV 594
.||||:||||||||||||||::||||:|..|..|.||||||||||||||:
BPUM_1275___y 545 TADVGVAMGGGTDVALETADLILMKNNLNNLTKMIRLSRKMNRIIKQNII 594
BSNT_02320___ 595 FSLAVICLLICANFLQVMELPFGVIGHEGSTILVILNGLRLLK-- 637
|||.|||||||||||||::|||||||||||||||||||||||:
BPUM_1275___y 595 FSLTVICLLICANFLQVLDLPFGVIGHEGSTILVILNGLRLLRAS 639
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