Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02544 and BPUM_1440

See DNA alignment / Visit BSNT_02544 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence pep-align/BSNT_02544___ylmH.1.24716.seq
#    -bsequence pep-align/BPUM_1440___ylmH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02544___ylmH-BPUM_1440___ylmH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02544___ylmH-BPUM_1440___ylmH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02544___ylmH
# 2: BPUM_1440___ylmH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     164/258 (63.6%)
# Similarity:   202/258 (78.3%)
# Gaps:           1/258 ( 0.4%)
# Score: 849.0
# 
#
#=======================================

BSNT_02544___      1 MSDIYQHFRKDERAFIDQALEWKRIVQEQYRMKLTDFLDPREQVILSAVT     50
                     ||||||||||||:.|:||.|.||:|..:|||:|||||||||||.|..:|.
BPUM_1440___y      1 MSDIYQHFRKDEQPFVDQVLGWKKIALDQYRLKLTDFLDPREQFITQSVI     50

BSNT_02544___     51 GQAD-VGLAFSGGYDRAERKRAILYPEYITPEVSDFELQAFNVCYADKFV     99
                     ..|| :|:.|.|||:.||||||::||||:.|...|.||..|.|.||.||:
BPUM_1440___y     51 QHADELGIMFFGGYEGAERKRALIYPEYLEPATQDAELSYFQVNYAKKFI    100

BSNT_02544___    100 SVDHRSLLGALMGIGLKRQKFGDIVFSETAVQLIVSADTADFVAAQLTQA    149
                     |::|..|||:|:|.|||||||||::|||..||.|.::|.||||.||||..
BPUM_1440___y    101 SLEHPKLLGSLIGTGLKRQKFGDLLFSEEDVQFICTSDVADFVRAQLTHV    150

BSNT_02544___    150 GKAAVSLEKIDLSDLNIPAVDVEIRDDTVSSLRLDAVCASMSRQSRQKSQ    199
                     |:|:||||:|..:||.......:|::||:||||||||||::|||||||:|
BPUM_1440___y    151 GRASVSLEEITQADLKPVISKTDIKEDTISSLRLDAVCAAISRQSRQKAQ    200

BSNT_02544___    200 TLVKNGLVKVNWKVVEDPSYIVAEGDMLSIRGFGRCSLTKIEGKTKKDKW    249
                     .|||||||||||||.||||:.:.|||.||:|||||.||..|:|||||||:
BPUM_1440___y    201 LLVKNGLVKVNWKVTEDPSFTIGEGDQLSVRGFGRFSLKTIDGKTKKDKF    250

BSNT_02544___    250 RVTFERQK    257
                     :||||...
BPUM_1440___y    251 KVTFELLT    258


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