Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02634 and BPUM_1512

See DNA alignment / Visit BSNT_02634 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:14
# Commandline: needle
#    -asequence pep-align/BSNT_02634___xerC.1.24716.seq
#    -bsequence pep-align/BPUM_1512___xerC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02634___xerC-BPUM_1512___xerC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02634___xerC-BPUM_1512___xerC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02634___xerC
# 2: BPUM_1512___xerC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     220/305 (72.1%)
# Similarity:   257/305 (84.3%)
# Gaps:           1/305 ( 0.3%)
# Score: 1144.0
# 
#
#=======================================

BSNT_02634___      1 MENVKNFVKLFVEYLQIEKNNSQYTIVNYVDSIEEFETFLRVQGINGFEE     50
                     |.|.:..|.||:||||||||.|..||..|.::||||..|:.||||:||||
BPUM_1512___x      1 MTNKQRLVHLFIEYLQIEKNYSALTISGYTEAIEEFVRFMNVQGIDGFEE     50

BSNT_02634___     51 AAYQDTRIFLTEAYEKGLSRRTISKKISALRSFYKFLMREKLIEENPFQL    100
                     .:||||||:|||||||||:|||||||:||||||||||:||:|::||||.|
BPUM_1512___x     51 VSYQDTRIYLTEAYEKGLTRRTISKKVSALRSFYKFLLREQLVKENPFLL    100

BSNT_02634___    101 VHLPKQEKRIPKFLYQKELEELFEVSDISQPAGMRDQALLELLYATGMRV    150
                     |.||||:||||.|||::||:|||.|||:|.|.|.|:||:|||||||||||
BPUM_1512___x    101 VSLPKQDKRIPSFLYEEELKELFTVSDVSTPLGQRNQAILELLYATGMRV    150

BSNT_02634___    151 SECCSITINDVDLFMDTVLVHGKGKKQRYIPFGSYAREALKVYMNSGRQC    200
                     ||.||:..:|:||.||||||||||.||||:||||||.|||..|:..||..
BPUM_1512___x    151 SELCSLKESDLDLSMDTVLVHGKGSKQRYVPFGSYAHEALITYLEDGRLK    200

BSNT_02634___    201 LLMKAKEPHD-LLFVNQRGGPLTARGIRHILSGLVQKASSTLHIHPHMLR    249
                     |..|.|:..| .:|:||||.|||.||:|.||:.|::|||.||||||||||
BPUM_1512___x    201 LKAKGKDRADAYVFLNQRGAPLTDRGVRFILTELMKKASGTLHIHPHMLR    250

BSNT_02634___    250 HTFATHLLNEGADLRSVQELLGHSNLSSTQIYTHVSKEMLRNTYMSHHPR    299
                     ||||||||||||||||||||||||||||||:||||||:.||.||||||||
BPUM_1512___x    251 HTFATHLLNEGADLRSVQELLGHSNLSSTQVYTHVSKDSLRKTYMSHHPR    300

BSNT_02634___    300 AFKKN    304
                     |||::
BPUM_1512___x    301 AFKRS    305


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