Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04989 and BPUM_1777
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:43
# Commandline: needle
# -asequence pep-align/BSNT_04989___yvgR.1.24716.seq
# -bsequence pep-align/BPUM_1777___cysJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04989___yvgR-BPUM_1777___cysJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04989___yvgR-BPUM_1777___cysJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04989___yvgR
# 2: BPUM_1777___cysJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 608
# Identity: 441/608 (72.5%)
# Similarity: 519/608 (85.4%)
# Gaps: 5/608 ( 0.8%)
# Score: 2360.5
#
#
#=======================================
BSNT_04989___ 1 MQLQVMNSPFNQEQAELLNRLLPTLTESQKIWLSGYLSAQSVSAQEAAGA 50
|||.|:||||:|:||:|||:||||||:.|||||:||||||:..|......
BPUM_1777___c 1 MQLHVLNSPFSQQQADLLNQLLPTLTDQQKIWLTGYLSAQAALAGSETAT 50
BSNT_04989___ 51 PAAAVSAEAPAPAVSKEVTVLYGSQTGNAQGLAENAGKQLEQSGFQVTVS 100
.:.:.||.|||..|||:|||||||||||::|||:.|.:.||:.|||||:|
BPUM_1777___c 51 QSPSPSAAAPAQPVSKDVTVLYGSQTGNSEGLAKRAAQHLEEKGFQVTLS 100
BSNT_04989___ 101 SMSDFKPNQLKKVTNLLIVVSTHGEGEPPDNALSFHEFLHGRRAPKLEDL 150
||||||||.|||:.|||::|||||||:||||||||||::||||||||:.|
BPUM_1777___c 101 SMSDFKPNNLKKIHNLLMIVSTHGEGDPPDNALSFHEYVHGRRAPKLDHL 150
BSNT_04989___ 151 RFSVLALGDSSYEFFCQTGKEFDQRLEELGGKRISPRVDCDLDYDEPAAE 200
.||||:|||||||||||||||||:|.:||||.|::.|||||||||||.:|
BPUM_1777___c 151 SFSVLSLGDSSYEFFCQTGKEFDERFKELGGTRLTDRVDCDLDYDEPFSE 200
BSNT_04989___ 201 WLEGVLKGLNEAGGGSAA---PAPPAASQTGESSYSRTNPFRAEVLENLN 247
||:||...|:| |.:|| .:..|.|:|..|.|||||||.||||||:|
BPUM_1777___c 201 WLQGVTASLSE--GEAAAFTQESAAANSETTVSEYSRTNPFYAEVLENIN 248
BSNT_04989___ 248 LNGRGSNKETRHVELSLEGSGLTYEPGDSLGVYPENDPELVELLLKEMNW 297
||||||||||||:|||||||||.||||||||:||.|||.||:.|:....|
BPUM_1777___c 249 LNGRGSNKETRHLELSLEGSGLVYEPGDSLGIYPTNDPTLVDELITTCGW 298
BSNT_04989___ 298 DPEEIVTLNKQGDVRPLKEALISHYEITVLTKPLLEQAAQLTGNDELREL 347
..:|.||::|.|:..||||||.||:||||||||||.:.|.||.|:.|..|
BPUM_1777___c 299 KADEAVTVHKNGETLPLKEALTSHFEITVLTKPLLHKLADLTKNEALHAL 348
BSNT_04989___ 348 LAPGNEENVKAYIEGRDLLDLVRDYGPFSVSAQEFVSILRKMPARLYSIA 397
|..||||.:||||.||||:|..||:|||..||.:|.:||||:||||||||
BPUM_1777___c 349 LKEGNEEKLKAYIAGRDLVDATRDFGPFEGSAADFTAILRKIPARLYSIA 398
BSNT_04989___ 398 SSLSANPDEVHLTIGAVRYDAHGRERKGVCSILCAERLQPGDTLPVYVQH 447
|||.||.:||||||||||||||||||:|||||||||||:||||||||:||
BPUM_1777___c 399 SSLKANEEEVHLTIGAVRYDAHGRERQGVCSILCAERLEPGDTLPVYIQH 448
BSNT_04989___ 448 NQNFKLPKDPETPIIMVGPGTGVAPFRSFMQEREETGAEGKAWMFFGDQR 497
|||||||::|:.||||||||||:||||||||||||.||.||:|:|||||.
BPUM_1777___c 449 NQNFKLPENPDAPIIMVGPGTGIAPFRSFMQEREEIGASGKSWLFFGDQH 498
BSNT_04989___ 498 FVTDFLYQTEWQNWLKDGVLTKMDVAFSRDTEEKVYVQHRMLEHSAELFE 547
||||||||||||.|||||||||||||||||:||||||||:|.:.|.||||
BPUM_1777___c 499 FVTDFLYQTEWQKWLKDGVLTKMDVAFSRDSEEKVYVQHQMKKQSKELFE 548
BSNT_04989___ 548 WLQEGAAVYICGDEKHMAHDVHNTLLEIIEKEGNMSREEAEAYLADMQQQ 597
||::||:||:||||||||||||:|||.||::||.||:|:||:|||::|||
BPUM_1777___c 549 WLEQGASVYVCGDEKHMAHDVHHTLLSIIQEEGAMSKEKAESYLANLQQQ 598
BSNT_04989___ 598 KRYQRDVY 605
||||||||
BPUM_1777___c 599 KRYQRDVY 606
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