Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06274 and BPUM_1826
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence pep-align/BSNT_06274___yyaE.1.24716.seq
# -bsequence pep-align/BPUM_1826___yoaE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06274___yyaE-BPUM_1826___yoaE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06274___yyaE-BPUM_1826___yoaE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06274___yyaE
# 2: BPUM_1826___yoaE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 701
# Identity: 235/701 (33.5%)
# Similarity: 365/701 (52.1%)
# Gaps: 55/701 ( 7.8%)
# Score: 927.5
#
#
#=======================================
BSNT_06274___ 1 -------MSKVHQSACPLNCWDSCGFLVTVDDGKVTKVDGDPNHPITEGK 43
...:.:|.|.|:|.|.||.|:..::||:.||.|||:||:|:|.
BPUM_1826___y 1 MTDYTAMKDGIFKSVCSLDCPDQCGLLIHKENGKIVKVQGDPDHPVTQGN 50
BSNT_06274___ 44 ICGRGRMLETKTNSPDRLRYPMK----KQNGEFVRISWEQALDEIADKLR 89
||.:.|.:..:.....||..|:| |.:|:|..|:||:|::.|..|..
BPUM_1826___y 51 ICNKMRNVTARLYDEKRLTTPLKRVGRKGDGQFAPITWEEAIETIRQKWT 100
BSNT_06274___ 90 EIKETSETTAVLHSHDYANNGLLKA--LDQRFFNGYGGVTEIVGSICWGS 137
::.:.....::|....|.|.|.|.| :|:|||...|. :::..:||..:
BPUM_1826___y 101 KLIDEKGPESILPYSFYGNMGNLNAEGMDRRFFYRLGS-SQLDRTICQSA 149
BSNT_06274___ 138 GIEAQSWDFGRSYGHGPLDIYNSKHVVVWGRNVSRTNMHLYHHLQQVKKK 187
|.....:..|.|.|..|.|..::|..:.||.|...||||.....|:.:|:
BPUM_1826___y 150 GTTGYKYTMGASIGTDPEDTIHTKLFIFWGINAVSTNMHQITLAQKARKQ 199
BSNT_06274___ 188 GATITVIDPIFNPTAKLADRYISVKPGMDGWLAAAVLKVLIETGRTDETF 237
||.|.|||...|.|.::||.:|.::||.|..||..::.||.:.|.|||.|
BPUM_1826___y 200 GAKIVVIDVHKNQTGRMADWFIPLRPGTDSALALGIMHVLFKEGLTDEAF 249
BSNT_06274___ 238 ISEHSVGFDDVKELLKTVSLEEFIVKTETSMEDLEYLAALYAD-GPVSTF 286
:..::.|..:::|.:|....:.....|..|.||:..||.:||: .|....
BPUM_1826___y 250 LETYTTGHQELREHVKQYDPDTVEGITGVSKEDIVTLARMYAETSPSLIR 299
BSNT_06274___ 287 MGLGMQRYKNGGGTIRWIDALVAASGNVGIKGGGANFGNVQIGESFAKTK 336
:|.|:|.:.|||.:||.|..|.|.:|....|||||...|... .|:.:|.
BPUM_1826___y 300 IGNGLQHHDNGGMSIRTISCLPALTGQWLHKGGGAMKSNSSF-LSYNETA 348
BSNT_06274___ 337 LTLPEL--KTTSRSFSMMTQAEEVLTAADPAIEMIIVTCGNPLTQVPNTN 384
|..|:| ..|.|||: |.|...|||.|.|:|:.:.|...||....|..|
BPUM_1826___y 349 LQRPDLLKDHTPRSFN-MNQLGSVLTNAAPSIDALFVYSSNPAVVTPEAN 397
BSNT_06274___ 385 KVRQAFEKVPM-TVAIDSIMTDTAELCDYVLPTATVFEEEDIYYSSMYHH 433
|||:...:..: ||..|..:|:||:..|.|||..:.||.|| :|:|.:||
BPUM_1826___y 398 KVREGLLREDLFTVVHDLFLTETAKYADIVLPATSAFENED-FYTSYWHH 446
BSNT_06274___ 434 YVQYGKKLVEPQGEAKSDSWIWSELAKRLGF-GELFEYSTQEFLEMGLSS 482
|:|..:.::|..||:||::.::..||..:|| .|.|..:..|.:|..|..
BPUM_1826___y 447 YIQIQEPVIERYGESKSNTEVFRLLAHAMGFEDEAFRETDAELMEQALHH 496
BSNT_06274___ 483 LE---AEDVTLERLKEKGHLPLPVKQVPWDDYQFLTPSGKFEFTSSLAEQ 529
.| .||::.|.||||.. :..|:.|:.|.:..|||||.|..|...::
BPUM_1826___y 497 PENPHYEDISYEALKEKKW--IKAKRGPFQDLKLSTPSGKIELYSEQMKK 544
BSNT_06274___ 530 KGFSGSLQLNVP--EESVFHNEELAEKYPYTLLS------IHPQRSNHSQ 571
.|:. :|...|| :|| :||.|.:. ::...|.|.:
BPUM_1826___y 545 DGYP-ALPTYVPLYQES---------EYPLTFIPGPNHNFLNSTFSLHEK 584
BSNT_06274___ 572 HVPFIEKLQHV-QVDISPDIAAEQNLQDGDEVVIFNDRGRLKGKVKVMKQ 620
| :||:.. ::.::.:.|..:.::|||.|.:.||||..:..|.|.:.
BPUM_1826___y 585 H----QKLEKFPKLHMNEEDAKAREIEDGDMVRVLNDRGECELVVSVGQN 630
BSNT_06274___ 621 AHAKTINIDEGMWAAFGGS---VNALTNDTNSDNGMGSTLFDCLVGLKKA 667
..:..: :.:|:||...|. ||.||.|..:|.|.|:|.|...|.::|.
BPUM_1826___y 631 VLSGVV-VSQGLWADQKGKKQLVNGLTPDRLADMGGGATFFSGRVEVEKL 679
BSNT_06274___ 667 - 667
BPUM_1826___y 680 S 680
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