Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05600 and BPUM_1834
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence pep-align/BSNT_05600.1.24716.seq
# -bsequence pep-align/BPUM_1834___ywmF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05600-BPUM_1834___ywmF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05600-BPUM_1834___ywmF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05600
# 2: BPUM_1834___ywmF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 78/212 (36.8%)
# Similarity: 109/212 (51.4%)
# Gaps: 53/212 (25.0%)
# Score: 431.0
#
#
#=======================================
BSNT_05600 1 MRQNHLLADGFFICKKRGASERLFPGRTGKIATALFFEQKPFWDADLHVR 50
BPUM_1834___y 0 -------------------------------------------------- 0
BSNT_05600 51 GNSMFGFNDMVKFLWSFLIVLPLVQIIHVSGHSFMAFIFGGKGSLDIGMG 100
||..:||..|.|||.::||:|.|:|..||..:|::||.|.|..:|.|
BPUM_1834___y 1 ---MFTLSDMWTFCWSFFVILPIVAILHQLGHILVAWMFGAKVSFALGRG 47
BSNT_05600 101 KTLLKIGPIRFRTIYFIDSFCRYGELKIDNRFSHALVYAGGCLFNLITIF 150
|.:||:|.:..|.|||:|:||.|.|::.:||.||.|||.||.|.||:::.
BPUM_1834___y 48 KKVLKVGVVEIRRIYFLDAFCHYEEMRKNNRLSHILVYLGGSLCNLLSVL 97
BSNT_05600 151 AINLLIIHSVLKPNVFFYQFVYFSTYYVFFALLPVRYSEKKSSDGLAIYK 200
.:|.:|.:..|..:.|||||.|||.||||||||||:|::...|||.||..
BPUM_1834___y 98 ILNTMIANDFLPEHQFFYQFAYFSVYYVFFALLPVQYADHHPSDGQAIVN 147
BSNT_05600 201 VLRYGERYEIDK 212
::|:||..:|..
BPUM_1834___y 148 IIRHGEPCDIID 159
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