Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03205 and BPUM_1886
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence pep-align/BSNT_03205___yodM.1.24716.seq
# -bsequence pep-align/BPUM_1886.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03205___yodM-BPUM_1886.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03205___yodM-BPUM_1886.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03205___yodM
# 2: BPUM_1886
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 89/207 (43.0%)
# Similarity: 135/207 (65.2%)
# Gaps: 9/207 ( 4.3%)
# Score: 453.5
#
#
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BSNT_03205___ 1 MYKPVSLFLFFLILAAAIHTNAVQSADEAISKAAVL----IRQPWLNEVM 46
|| .|..|||..||....|..|.:|:....:| ||.|:||:||
BPUM_1886 1 MY-----ILCLLILFGAIAALMVSGAGQALDNQIILSFERIRLPFLNDVM 45
BSNT_03205___ 47 TGITHLGASSFLLPLIVIIGAGMFFYRKTWDGLLMLLVFGTDRLLNKVLK 96
..:|..|.|:.|:|:::|....:|.|::.:..:::.|::.|::.:|..||
BPUM_1886 46 LTLTDFGISALLVPIMLIFSVALFIYKRYYSIMMLFLLYLTEKTINHELK 95
BSNT_03205___ 97 EWIERVRPDFAPLVHESSFSFPSGHSMNAACVYPVIAYFLVKHLPFLSKH 146
....|.||.|..||:|:.:|||||||||||.:||.|||.||:.:|:|.:.
BPUM_1886 96 GLFARERPAFDHLVNETYYSFPSGHSMNAATIYPFIAYLLVEMIPWLKER 145
BSNT_03205___ 147 KKMVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFDEK 196
:|:||:|.|:..:::|:||:|:||||:|||.|||::||.||.:.|..|||
BPUM_1886 146 QKIVYLITGICVLMIGVSRMYIGVHFLTDVAGGFAIGLALFLICKKIDEK 195
BSNT_03205___ 197 IKRFRQK 203
:...|||
BPUM_1886 196 LSVIRQK 202
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