Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03257 and BPUM_1921

See DNA alignment / Visit BSNT_03257 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:44
# Commandline: needle
#    -asequence pep-align/BSNT_03257___yphP.1.24716.seq
#    -bsequence pep-align/BPUM_1921___yphP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03257___yphP-BPUM_1921___yphP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03257___yphP-BPUM_1921___yphP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03257___yphP
# 2: BPUM_1921___yphP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity:     115/144 (79.9%)
# Similarity:   130/144 (90.3%)
# Gaps:           0/144 ( 0.0%)
# Score: 608.0
# 
#
#=======================================

BSNT_03257___      1 MSMAYEEYMRQLVVPMRRELTGAGFEELTTAEEVENFMEKAEGTTLVVVN     50
                     |||||||||||||||||:|||.|||:||||.||||..|::|||||.||||
BPUM_1921___y      1 MSMAYEEYMRQLVVPMRQELTSAGFQELTTEEEVEQTMQEAEGTTFVVVN     50

BSNT_03257___     51 SVCGCAAGLARPAATQAVLQNDKTPDNTVTVFAGQDKEATAKMREYFTGQ    100
                     ||||||||||||||||||::.:|.||..||||||||:||||||||||||:
BPUM_1921___y     51 SVCGCAAGLARPAATQAVMKAEKAPDKIVTVFAGQDREATAKMREYFTGE    100

BSNT_03257___    101 EPSSPSMALLKGKEVVHFIPRHEIEGHDMEEIMRNLTAAFDAHC    144
                     ||||||||||||.|:||||||.|||||:||:||:|:..||:.||
BPUM_1921___y    101 EPSSPSMALLKGNELVHFIPRDEIEGHEMEDIMKNVLTAFEKHC    144


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