Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03276 and BPUM_1934
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence pep-align/BSNT_03276___ypdP.1.24716.seq
# -bsequence pep-align/BPUM_1934___ypdP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03276___ypdP-BPUM_1934___ypdP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03276___ypdP-BPUM_1934___ypdP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03276___ypdP
# 2: BPUM_1934___ypdP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity: 175/229 (76.4%)
# Similarity: 197/229 (86.0%)
# Gaps: 0/229 ( 0.0%)
# Score: 923.0
#
#
#=======================================
BSNT_03276___ 1 MFNNSFWIFFAIIHFIIVLLFYKGFGKMGLFVWIGFATVCANLQVVKTVE 50
|||...||.||||:||||||||||||||||||||||||..||||||||||
BPUM_1934___y 1 MFNEGIWILFAIINFIIVLLFYKGFGKMGLFVWIGFATAAANLQVVKTVE 50
BSNT_03276___ 51 LFGLTATLGNVMYGTIFFATDVLNEKYGPAEARKAVWLGFSTLLTLTFVM 100
||||||||||::||::||||||||||||..||:||||:||:||||||.||
BPUM_1934___y 51 LFGLTATLGNILYGSVFFATDVLNEKYGQHEAKKAVWIGFTTLLTLTIVM 100
BSNT_03276___ 101 QGVLLFEPASSDISQTALETIFGFLPRVALGSLLAFIFSQTLDVYVYSAI 150
|..|||:||.|||||::|||||||:||||||||.|:|.||.|||||||.|
BPUM_1934___y 101 QEALLFDPAPSDISQSSLETIFGFMPRVALGSLAAYIISQMLDVYVYSFI 150
BSNT_03276___ 151 RRIFPSDRLLWLRNGGSTAVSQLFDTFIFTSVAFLGIYPAGVWLHIFIST 200
|||||||..||:||.|||.:|||.||.|||::||||.||..||:.|||:|
BPUM_1934___y 151 RRIFPSDGALWMRNAGSTMISQLLDTLIFTTIAFLGTYPTQVWIEIFITT 200
BSNT_03276___ 201 YLIKFAVSLISLPYAYAAKKMIPKDERSS 229
|:|||.|:.||.|||||||||:|.|||..
BPUM_1934___y 201 YVIKFIVAAISTPYAYAAKKMVPLDERVK 229
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