Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03341 and BPUM_1974
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:50
# Commandline: needle
# -asequence pep-align/BSNT_03341___panB.1.24716.seq
# -bsequence pep-align/BPUM_1974___panB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03341___panB-BPUM_1974___panB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03341___panB-BPUM_1974___panB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03341___panB
# 2: BPUM_1974___panB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity: 213/279 (76.3%)
# Similarity: 240/279 (86.0%)
# Gaps: 2/279 ( 0.7%)
# Score: 1103.0
#
#
#=======================================
BSNT_03341___ 1 MKTKLDFLKMKESEEPIVMLTAYDYPAAKLAEQAGVDMILVGDSLGMVVL 50
|||||||.||||..||||||||||||:||.||:|.|||||||||||||||
BPUM_1974___p 1 MKTKLDFFKMKEQNEPIVMLTAYDYPSAKQAEKAEVDMILVGDSLGMVVL 50
BSNT_03341___ 51 GLDSTVGVTVADMIHHTKAVKRGAPNTFIVTDMPFMSYHLSKEDTLKNAA 100
|||||:.||:.|||||||||||||.:|||||||||||||.|..:||||||
BPUM_1974___p 51 GLDSTIQVTIDDMIHHTKAVKRGAKDTFIVTDMPFMSYHYSLAETLKNAA 100
BSNT_03341___ 101 AIVQESGADALKLEGGEGVFESIRALTLGGIPVVSHLGLTPQSVGVLGGY 150
.|:|||||||||||||:||||||:|||.||||||||||||||||||||||
BPUM_1974___p 101 RIMQESGADALKLEGGDGVFESIQALTRGGIPVVSHLGLTPQSVGVLGGY 150
BSNT_03341___ 151 KVQGKDEQSAKKLIEDSIKCEEAGAMMLVLECVPAELTAKIADTLSIPVI 200
||||||.:||:||||||:|||||||:.|||||||.|||.:|.|.|.||||
BPUM_1974___p 151 KVQGKDHESAQKLIEDSLKCEEAGAIALVLECVPGELTKRITDMLKIPVI 200
BSNT_03341___ 201 GIGAGVKADGQVLVYHDIIGHGVERTPKFVKQYTRIDETIETAISGYVQD 250
|||||.:||||||||||::|:||.|||||||||.:||..:|.|:..|.::
BPUM_1974___p 201 GIGAGAEADGQVLVYHDVVGYGVSRTPKFVKQYAQIDTLLEEALIQYTKE 250
BSNT_03341___ 251 VRHRAFPEQKHSFQMNQTVLDGLYGGK-- 277
|:...|||.||:|.:.:.||||||||.
BPUM_1974___p 251 VKAHTFPEDKHTFHIKEEVLDGLYGGIKK 279
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