Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00615 and BPUM_2333

See DNA alignment / Visit BSNT_00615 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:24
# Commandline: needle
#    -asequence pep-align/BSNT_00615___hxlA.1.24716.seq
#    -bsequence pep-align/BPUM_2333___hxlA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00615___hxlA-BPUM_2333___hxlA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00615___hxlA-BPUM_2333___hxlA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00615___hxlA
# 2: BPUM_2333___hxlA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 210
# Identity:     158/210 (75.2%)
# Similarity:   182/210 (86.7%)
# Gaps:           0/210 ( 0.0%)
# Score: 797.0
# 
#
#=======================================

BSNT_00615___      1 MELQLALDLVNIPEAIELVKEVEQYIDVVEIGTPVVINEGLRAVKEIKEA     50
                     |:||||||||||||||||:||||..|||||||||||||||||||||:|:|
BPUM_2333___h      1 MKLQLALDLVNIPEAIELIKEVEGSIDVVEIGTPVVINEGLRAVKEVKQA     50

BSNT_00615___     51 FPQLKVLADLKIMDAGGYEIMKASEAGADIIIVLGATDDATIKGAVEEAK    100
                     ||.|:||||||||||.|||:.:||||||||:.:|.|.:|.:|:|||:|||
BPUM_2333___h     51 FPNLRVLADLKIMDAAGYEVQQASEAGADIVTILAAAEDMSIQGAVKEAK    100

BSNT_00615___    101 KQKKKILVDMINVKDIESRAKEIDALGVDYICVHTGYDLQAEGKNSFEEL    150
                     .:.|:||||||.:|||..||||:|.||||||||||||||||.|:|||.:|
BPUM_2333___h    101 ARGKQILVDMIGIKDIAGRAKELDELGVDYICVHTGYDLQAVGQNSFADL    150

BSNT_00615___    151 TTIKNTVKNAKTAIAGGIKLDTLPEVIKQNPDLVIVGGGITSAADKAETA    200
                     .|||..||.|||||||||||||||||:|.||||:||||||.|..:|||.|
BPUM_2333___h    151 LTIKQVVKQAKTAIAGGIKLDTLPEVVKLNPDLIIVGGGIASQDNKAEVA    200

BSNT_00615___    201 SKMKQLIVQG    210
                     ::|||||.|.
BPUM_2333___h    201 AQMKQLIAQS    210


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.