Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06018 and BPUM_2336

See DNA alignment / Visit BSNT_06018 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:32
# Commandline: needle
#    -asequence pep-align/BSNT_06018.1.24716.seq
#    -bsequence pep-align/BPUM_2336___yxiJ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06018-BPUM_2336___yxiJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06018-BPUM_2336___yxiJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06018
# 2: BPUM_2336___yxiJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity:      44/123 (35.8%)
# Similarity:    69/123 (56.1%)
# Gaps:          12/123 ( 9.8%)
# Score: 212.0
# 
#
#=======================================

BSNT_06018         1 MKFFKRYNI--DQKTL--DEFKKYYVLLHGPFPNDMYDFEEETNTSLDEF     46
                           .||  |:|.|  |..::|....|..:|.|:..|||||....|:|
BPUM_2336___y      1 ------MNISQDKKELINDLKQRYQYCFHSAYPEDIVFFEEETGIWSDDF     44

BSNT_06018        47 YEFFALITGSLNYIIEDKKIPRYQREMLKKTFYEHYPHFRNYKSDILKYQ     96
                     ||||.|:||||:|:|:.|:||:.|..:|:::|.|.||..::::..:..|.
BPUM_2336___y     45 YEFFTLVTGSLSYVIDHKRIPKKQLNVLRQSFEEQYPQIKSFQHILESYP     94

BSNT_06018        97 ELSECLEFHEKIRILINKLITGG    119
                     .|...:::||:.|..|...|.  
BPUM_2336___y     95 LLHSYIQYHEETRKRIIAFIK--    115


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