Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00777 and BPUM_2341

See DNA alignment / Visit BSNT_00777 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:32
# Commandline: needle
#    -asequence pep-align/BSNT_00777___ydbM.1.24716.seq
#    -bsequence pep-align/BPUM_2341___ydbM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00777___ydbM-BPUM_2341___ydbM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00777___ydbM-BPUM_2341___ydbM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00777___ydbM
# 2: BPUM_2341___ydbM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity:     206/387 (53.2%)
# Similarity:   271/387 (70.0%)
# Gaps:           6/387 ( 1.6%)
# Score: 1114.0
# 
#
#=======================================

BSNT_00777___      1 --MSLFIQNDQQRQWMEKIGRIADEFQQTAAEDDEQGRFPAEKIQKLRDA     48
                       .:||:..|.|:.|:.::..:.:..:|||.|.||...||.:.|:.|.:.
BPUM_2341___y      1 MSKALFVDTDFQKTWLHQLESLRETIEQTAKEHDEGAYFPEKNIESLIEM     50

BSNT_00777___     49 GYTALTLPASHGGGGISVYDMLLFQERLARGDAPTALSIGWHLSVIGELG     98
                     |||.|:|||.|||||.||.||:||||.|...|..|.||||||..|:||:.
BPUM_2341___y     51 GYTTLSLPAEHGGGGQSVKDMVLFQETLGSMDGATTLSIGWHQGVVGEIY    100

BSNT_00777___     99 EGNSWDEDVFAFVAKEVQNGAVINRAATEAKTGSPTRGGRPGTHAVKKDG    148
                     |...|:|....|.|:||:.||::|||.:||:||||||||:|||.|.:...
BPUM_2341___y    101 EKKQWNEQQLQFFAEEVKKGALVNRAVSEAQTGSPTRGGKPGTTATRSGN    150

BSNT_00777___    149 KWAVNGRKTFTTMSQALDYFLVTAWIEDKQTTGVFLIHKDDPGLSIEETW    198
                     :|.:||||.|||||.||.||||..|||:|:..|.||||::..|:||||||
BPUM_2341___y    151 EWIINGRKIFTTMSPALTYFLVGVWIEEKEAMGFFLIHRETAGVSIEETW    200

BSNT_00777___    199 DMMAMRASGSHDLVLNEVMLDENKLVELLQGPRGAKPNGWLLHIPAIYLG    248
                     :::.||.:.||||:|::|.:.::.|||:.:||||...|.|:.|||:.|||
BPUM_2341___y    201 NVVGMRGTESHDLILDQVKVSDDMLVEVQKGPRGGTLNPWIAHIPSCYLG    250

BSNT_00777___    249 VAQAARDYAVQFASEYSPNSLNGPIKNVPAVQQRTGEMELELLNARHFLF    298
                     :||||||||||:|..:||||:||.|.::|.||...||::|.|..|||.::
BPUM_2341___y    251 IAQAARDYAVQYAITHSPNSINGTISDLPNVQTLIGEIDLLLKQARHVIY    300

BSNT_00777___    299 HIAQLYDDPERRPHLTSELGAAKHIVTNAALSVVDKAMRIVGAKSLERTN    348
                     ....||:.||:|..|.:|.||.||.|.|.:|.|||||||:||||||....
BPUM_2341___y    301 STTTLYEKPEKRELLINEFGAVKHTVVNHSLQVVDKAMRLVGAKSLSLDC    350

BSNT_00777___    349 PLQRYYRDVRAGLHNPPMDDAVIHKLAAEAFES----    381
                     ||||||||:|||||||||||..|.|:|.:|.:.    
BPUM_2341___y    351 PLQRYYRDIRAGLHNPPMDDMTISKMAKQAIQEKKES    387


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