Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04048 and BPUM_2427
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:33
# Commandline: needle
# -asequence pep-align/BSNT_04048___nadB.1.24716.seq
# -bsequence pep-align/BPUM_2427___nadB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04048___nadB-BPUM_2427___nadB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04048___nadB-BPUM_2427___nadB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04048___nadB
# 2: BPUM_2427___nadB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 540
# Identity: 279/540 (51.7%)
# Similarity: 355/540 (65.7%)
# Gaps: 25/540 ( 4.6%)
# Score: 1343.5
#
#
#=======================================
BSNT_04048___ 1 --MSKKTIAVIGSGAAALSLAAAFPPSYEVTVITKKSVKNSNSVYAQGGI 48
.|.|.|.|:|||.||||.|.....|.||.::|||...:|||:.|||||
BPUM_2427___n 1 MVSSIKKIIVVGSGIAALSFAKTISASCEVIMMTKKQFSSSNSMLAQGGI 50
BSNT_04048___ 49 AAAYAKDDSIEAHLEDTLYAGCGHNNLAIAADVLHDGKMMVQSLLERGFP 98
|||::..||::.|::|||.|||.||:..:..:::..||.||:.|:|.|.|
BPUM_2427___n 51 AAAFSAQDSVDQHVQDTLAAGCDHNDERVVQEIVSLGKHMVKQLVEEGCP 100
BSNT_04048___ 99 FDRNERGGVCLGREGAHSYNRIFHAGGDATGGLLIDYLLKRINSKIKLIE 148
||:.|.|...||:||||:.:||.|||||.||..|:.||..::.|.|.|.|
BPUM_2427___n 101 FDQTENGMPQLGKEGAHTTHRILHAGGDQTGKTLVQYLKNQLGSHIHLCE 150
BSNT_04048___ 149 NEMAADLLIEDGRCIGVMTKDSKGRLKVRHADEVVLAAGGCGNLFLHHTN 198
.....|||:.:|.||||:.||.||.:....||.|||:.||||:||..:||
BPUM_2427___n 151 YHHVIDLLVHEGICIGVVWKDEKGHVHTMTADAVVLSTGGCGSLFETNTN 200
BSNT_04048___ 199 DLTVTGDGLSLAYRAGAELTDLEFTQFHPTLLVKNGVSYGLVSEAVRGEG 248
|.:||||||.:||||||:|.||||.|||||||...|.:.|||||||||||
BPUM_2427___n 201 DPSVTGDGLIMAYRAGAQLVDLEFVQFHPTLLTIAGKAVGLVSEAVRGEG 250
BSNT_04048___ 249 GCLVDENGRRIMAERHPLGDLAPRDIVSRVIHEEMAKGNRVYIDFSAISD 298
..|.||.|||||...||.|||||||||||.|..|...|:.:|::.|.|..
BPUM_2427___n 251 AYLEDETGRRIMKGIHPQGDLAPRDIVSRAIFHEQQFGHDLYLNISEIPH 300
BSNT_04048___ 299 FETRFPTITAICEKAGVDIHSGKIPVAPGMHFLMGGVSVNRWGETTVPGL 348
|..|||.|.|:||:||||:.||::||:|||||||||:.||.:||||||.|
BPUM_2427___n 301 FSVRFPAIAAMCERAGVDMASGRLPVSPGMHFLMGGICVNEYGETTVPSL 350
BSNT_04048___ 349 YAIGETACSGLHGANRLASNSLLEALVFGKRAAEHIIQKPVYNRQYQSGL 398
:||||.||:|||||||||||||||.||.|.:||..|.|.| :.:..:
BPUM_2427___n 351 FAIGEAACTGLHGANRLASNSLLEGLVLGNKAARRIEQFP----KRKKTI 396
BSNT_04048___ 399 ETSVVYE---VPDIEVYELQSKMTSHMSILREQSSLIELSIWLHTLPFQE 445
.:|.:.| ||:|...:|...|.::.:|:|::..|..|...|..:|:|:
BPUM_2427___n 397 PSSTIQESWSVPEISEKQLSQWMMTYAAIVRDEDGLKTLLQSLLQVPYQQ 446
BSNT_04048___ 446 VNVKDITIRQMELSHLWQTAKLMTFSALLREESRGAHFRTDFPHA-EVSW 494
:||||||..|:|||:....|..:..|||||.||||.|:|.|:|:. :..|
BPUM_2427___n 447 INVKDITNGQIELSNQCTLAICLVRSALLRTESRGGHYRVDYPNRNDALW 496
BSNT_04048___ 495 QGRQIVHTKKGTKIRKNEGI---WNNESFTAEKITESLFS 531
:|.||||.|....|.|||.| ||..|
BPUM_2427___n 497 RGMQIVHEKGHIHIMKNERIGAKWNVYS------------ 524
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