Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04084 and BPUM_2451
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:35
# Commandline: needle
# -asequence pep-align/BSNT_04084___ysxE.1.24716.seq
# -bsequence pep-align/BPUM_2451___ysxE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04084___ysxE-BPUM_2451___ysxE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04084___ysxE-BPUM_2451___ysxE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04084___ysxE
# 2: BPUM_2451___ysxE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 344
# Identity: 192/344 (55.8%)
# Similarity: 245/344 (71.2%)
# Gaps: 4/344 ( 1.2%)
# Score: 1047.0
#
#
#=======================================
BSNT_04084___ 1 MEDTQSVLQEYGLTAQFIEPVSPLVWKVYTDYGIFALKKLKEGRGKHFTD 50
|::.||||.||||.|::||||||.|.||||..|.||||::|..|...||:
BPUM_2451___y 1 MDEIQSVLYEYGLEAEYIEPVSPAVVKVYTKQGAFALKRVKASRHMQFTE 50
BSNT_04084___ 51 HMVAIEEKGFRSFVPVYRTNSGEFFSAGIQYGDTYYLMPWLQFDQEEERD 100
.|:.:|.||:|||||:|||.||.|||:..:....|||||||..::.||:|
BPUM_2451___y 51 QMLELESKGYRSFVPIYRTKSGSFFSSHRESQYAYYLMPWLTNEKREEQD 100
BSNT_04084___ 101 QKHAYLFRETARLHERTAQELKVRRDEIERYYGQTKKKWEQDKIFYEQFV 150
.||.|||:|.||||:||...:.:...|||.:|.|.|.|||.:|..||:|:
BPUM_2451___y 101 DKHEYLFQEIARLHKRTEVMMDITEQEIEAHYTQIKTKWETEKDMYERFI 150
BSNT_04084___ 151 DRAEKEWYLSPFELQAITYFSETISAVNFALERLEDWYESAKEKDVSRVV 200
:|||:.||:|||||.|..||||.:||..|||||||||:|..|:|:.:|||
BPUM_2451___y 151 ERAEQTWYMSPFELAAAMYFSEAMSASEFALERLEDWHEEMKDKETTRVV 200
BSNT_04084___ 201 MNHGSLSIHHFLYNDAGTGYFTNFERASVGPPQNDLLGFYTKMFRGFPKA 250
:|||.||||||||||.|||:||||||:....|..|||.||.:.|:.:|.:
BPUM_2451___y 201 LNHGQLSIHHFLYNDVGTGHFTNFERSKKAAPIYDLLTFYFRTFKTYPTS 250
BSNT_04084___ 251 CPECVEWFYGYTKSFPLREAEVSLFLSYMAYPAAMYKVLNGYQTGKRQHE 300
||||...||.|.|..||||.|:.|||||:|||..::..:..|:.| .|.|
BPUM_2451___y 251 CPECTSLFYMYQKGNPLREEELHLFLSYLAYPQGLFDTVKTYEAG-GQDE 299
BSNT_04084___ 301 KEECTQLLKAYWQMKNIEPFVMKIHQIEQEKKFQAENESTS--- 341
.|.|.:||:|||||||.||.|||||:|||.::.:.|..::|
BPUM_2451___y 300 MESCQELLRAYWQMKNSEPTVMKIHEIEQARRLEEEQSASSSAE 343
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