Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04160 and BPUM_2508
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:40
# Commandline: needle
# -asequence pep-align/BSNT_04160___xsa.1.24716.seq
# -bsequence pep-align/BPUM_2508___abfA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04160___xsa-BPUM_2508___abfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04160___xsa-BPUM_2508___abfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04160___xsa
# 2: BPUM_2508___abfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 505
# Identity: 330/505 (65.3%)
# Similarity: 403/505 (79.8%)
# Gaps: 16/505 ( 3.2%)
# Score: 1857.0
#
#
#=======================================
BSNT_04160___ 1 MKGMIRGMSEHQAVIQTDIVKGTINKNIYGHFAEHLGRGIYEGIWVGTDS 50
|||.:: ..|:: |.|:|:|||||.||||||||:|||||.||
BPUM_2508___a 1 MKGTVK---------VNDVI-GRISKHIYGHFQEHLGRGIYDGIWVGKDS 40
BSNT_04160___ 51 DIPNINGIRKDVLEALKQLHIPVLRWPGGCFADEYHWANGVGD---RKTM 97
:|.:|.|||.|||:||:.||||||||||||||||||||||||| ||.|
BPUM_2508___a 41 EIDHIEGIRTDVLKALQALHIPVLRWPGGCFADEYHWANGVGDLSERKPM 90
BSNT_04160___ 98 LNTHWGGTIESNEFGTHEFMMLCELLECEPYICGNVGSGTVQEMAEWIEY 147
:|||||||:|||||||||||.||||||||||||||||||||||:|:|:||
BPUM_2508___a 91 VNTHWGGTVESNEFGTHEFMKLCELLECEPYICGNVGSGTVQELADWVEY 140
BSNT_04160___ 148 MTFEEGTPMSDWRKQNGREEPWKLKYFGVGNENWGCGGNMHPEYYADLYR 197
:||.:||||||||.|||:.|||.|.|.|||||:|||||||.||||||||:
BPUM_2508___a 141 ITFPKGTPMSDWRIQNGKHEPWDLTYVGVGNESWGCGGNMTPEYYADLYK 190
BSNT_04160___ 198 RFQTYVRNYSGNDIYKIAGGANVDDFNWTDVLMKKAAGLMDGLSLHYYTI 247
|:|||||.:.|..|||||.|||.:|.|||.|||::||..||||||||||:
BPUM_2508___a 191 RYQTYVREFVGQSIYKIACGANSNDVNWTKVLMERAAPWMDGLSLHYYTV 240
BSNT_04160___ 248 PGDFWNGKGSATEFTEDEWFITMKKAKYIDELIQKHGTIMDRYDPEQRVG 297
||. |..|||||||.|||||||:|||..::.|:..||.|||||||::|:|
BPUM_2508___a 241 PGT-WEKKGSATEFDEDEWFITLKKAYEMERLVLDHGEIMDRYDPDKRIG 289
BSNT_04160___ 298 LIIDEWGTWFDPEPGTNPGFLYQQNTIRDALVAASHFHIFHQHCRRVQMA 347
:||||||||:||||||||||||||||:|||||.|.||||||:||:|:.||
BPUM_2508___a 290 MIIDEWGTWYDPEPGTNPGFLYQQNTLRDALVCALHFHIFHRHCQRIHMA 339
BSNT_04160___ 348 NIAQTVNVLQAMILTEGERMLLTPTYHVFNMFKVHQDASLLATETMSADY 397
||||||||||||:|||.|:||||||||||:||:|||....|..:.:|..|
BPUM_2508___a 340 NIAQTVNVLQAMVLTEDEKMLLTPTYHVFHMFQVHQVEEALEVDFVSTPY 389
BSNT_04160___ 398 EWKGETLPQISISASKQAEGDVNITICNIDHQNKAEAEIELRGLHKAADH 447
|..||.:||:|:|||:.:: .::|:.|:::...:.|..:.:.||......
BPUM_2508___a 390 ERSGEKIPQVSVSASRSSD-KMHISFCHLNPHEQNEVSLAIEGLDAQTKV 438
BSNT_04160___ 448 PGVILTAEKMNAHNTFDDPHHVKPESFRQYTLSKNKLKVKLPPMSVVLLT 497
.|.:|||::|||||||||||.|:|..|:|:.:...:|.:.|||||||::|
BPUM_2508___a 439 TGRVLTADRMNAHNTFDDPHAVQPVEFQQFAVKSGELTIDLPPMSVVMIT 488
BSNT_04160___ 498 LRAYS 502
:...
BPUM_2508___a 489 IDLA- 492
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