Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04223 and BPUM_2537

See DNA alignment / Visit BSNT_04223 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence pep-align/BSNT_04223___ysaA.1.24716.seq
#    -bsequence pep-align/BPUM_2537___ysaA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04223___ysaA-BPUM_2537___ysaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04223___ysaA-BPUM_2537___ysaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04223___ysaA
# 2: BPUM_2537___ysaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     208/276 (75.4%)
# Similarity:   227/276 (82.2%)
# Gaps:          17/276 ( 6.2%)
# Score: 1114.0
# 
#
#=======================================

BSNT_04223___      1 MSLLAERFESEAEEKIMKAVFFDLDDTLLWDEKSVRTTFAETCLQAEKKY     50
                                     ||||||||||||||||||:.|||.|||.:|||||
BPUM_2537___y      1 ----------------MKAVFFDLDDTLLWDEKSIHTTFQETCREAEKKY     34

BSNT_04223___     51 GLDPEEFEAAVREAARELYMSYETYPYTVMIGINPFEGLWSNFSEPISEG    100
                     ||:||.||..|||.||:||.|||||.||||||||||||||||||||||||
BPUM_2537___y     35 GLNPETFEQIVREEARKLYSSYETYDYTVMIGINPFEGLWSNFSEPISEG     84

BSNT_04223___    101 FQKLNKIVPEYRRNAWTNGLKALGIDDPAYGEYLGEFFAAERRKRPFVYD    150
                     |||||.|.||||:||||||||..||||.|:|:||.:|||||||||||||:
BPUM_2537___y     85 FQKLNAIAPEYRKNAWTNGLKEAGIDDEAFGQYLADFFAAERRKRPFVYE    134

BSNT_04223___    151 ETFAVLDQLKGKYELLLLTNGDPSLQKEKLAGVPELAPYFNEIVISGAFG    200
                     ||:.||::|||.|||||||||||||||||||||||||||||||||||.:|
BPUM_2537___y    135 ETYPVLNRLKGNYELLLLTNGDPSLQKEKLAGVPELAPYFNEIVISGDYG    184

BSNT_04223___    201 KGKPDVSIFEHCLKLMNIENDDAIMVGDNLNTDILGASRAGIKTVWINRT    250
                     |||||..||||||:|:|:..||.||||||..||||||||.||:||||||.
BPUM_2537___y    185 KGKPDPGIFEHCLQLLNLTKDDVIMVGDNPKTDILGASRVGIQTVWINRH    234

BSNT_04223___    251 DKKNETDVTPDYIISSLHDLFPILEK    276
                     .|||||||||||.|..||:||.||: 
BPUM_2537___y    235 GKKNETDVTPDYEIKDLHELFDILK-    259


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