Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04252 and BPUM_2554
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence pep-align/BSNT_04252___mdh.1.24716.seq
# -bsequence pep-align/BPUM_2554___mdh.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04252___mdh-BPUM_2554___mdh.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04252___mdh-BPUM_2554___mdh.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04252___mdh
# 2: BPUM_2554___mdh
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity: 292/312 (93.6%)
# Similarity: 305/312 (97.8%)
# Gaps: 0/312 ( 0.0%)
# Score: 1477.0
#
#
#=======================================
BSNT_04252___ 1 MGNTRKKVSVIGAGFTGATTAFLIAQKELADVVLVDIPQLENPTKGKALD 50
|.|.|||||||||||||||||||.||||||||||||||||||||||||||
BPUM_2554___m 1 MANKRKKVSVIGAGFTGATTAFLTAQKELADVVLVDIPQLENPTKGKALD 50
BSNT_04252___ 51 MLEASPVQGFDAKITGTSNYEDTAGSDIVVITAGIARKPGMSRDDLVSSN 100
||||||||||||.||||||||||||||:||||||||||||||||||||:|
BPUM_2554___m 51 MLEASPVQGFDANITGTSNYEDTAGSDVVVITAGIARKPGMSRDDLVSTN 100
BSNT_04252___ 101 EKIMRSVTREIVKYSPDSIIVVLTNPVDAMTYAVYKESGFPKERVIGQSG 150
||||||||||||||||::|||||||||||||||||||||.|||:||||||
BPUM_2554___m 101 EKIMRSVTREIVKYSPEAIIVVLTNPVDAMTYAVYKESGLPKEKVIGQSG 150
BSNT_04252___ 151 VLDTARFRTFVAEELNLSVKDVTGFVLGGHGDDMVPLVRYSYAGGIPLET 200
:|||||||||||:|||||||||||||||||||||||||||||||||||||
BPUM_2554___m 151 ILDTARFRTFVAQELNLSVKDVTGFVLGGHGDDMVPLVRYSYAGGIPLET 200
BSNT_04252___ 201 LIPKERIDAIVERTRKGGGEIVNLLGNGSAYYAPAASLTEMVEAILKDQR 250
||||||||||||||||||||||||||||||||||||||.|||||||||||
BPUM_2554___m 201 LIPKERIDAIVERTRKGGGEIVNLLGNGSAYYAPAASLVEMVEAILKDQR 250
BSNT_04252___ 251 RVLPTIAYLEGEYGYEGIYLGVPTIIGGNGLEQIIELELTDYERAQLNKS 300
||:||||||||||||||||||||||:||||||||||||||:.||:||::|
BPUM_2554___m 251 RVMPTIAYLEGEYGYEGIYLGVPTIVGGNGLEQIIELELTEEERSQLDRS 300
BSNT_04252___ 301 VESVKNVMKVLS 312
||||||||||||
BPUM_2554___m 301 VESVKNVMKVLS 312
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