Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04294 and BPUM_2580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:50
# Commandline: needle
# -asequence pep-align/BSNT_04294___ytxK.1.24716.seq
# -bsequence pep-align/BPUM_2580___ytxK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04294___ytxK-BPUM_2580___ytxK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04294___ytxK-BPUM_2580___ytxK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04294___ytxK
# 2: BPUM_2580___ytxK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity: 201/333 (60.4%)
# Similarity: 257/333 (77.2%)
# Gaps: 13/333 ( 3.9%)
# Score: 1062.0
#
#
#=======================================
BSNT_04294___ 1 MQKDHVGAVYELLNEAAIMIKNELQISYIEALAEAGEMYFLEKTDQLKLP 50
||||.|..::|||:.|:|.:|.|..||||||||||||.:| .
BPUM_2580___y 1 MQKDQVSTIFELLDTASIRLKKEQSISYIEALAEAGEAFF---------Q 41
BSNT_04294___ 51 ADQKTKQLQALLEKAEFGTYEHEWVRKAFQLAVLKGMKDISHPNRQMTPD 100
|:.:...|:.::|||:|.:|:||.:|||||||||||.|||||||||||||
BPUM_2580___y 42 ANDRDGLLKDVIEKADFASYDHEQIRKAFQLAVLKGQKDISHPNRQMTPD 91
BSNT_04294___ 101 TIGLFISYLVNKFMADKKELTILDPALGTGNLLFTVLNQLSEKTANSFGI 150
|||||:|||||||:..:|||.:.|||.||||||..|||.|:.:|...|..
BPUM_2580___y 92 TIGLFVSYLVNKFLEGQKELVVFDPAAGTGNLLLAVLNNLTAETKRGFAS 141
BSNT_04294___ 151 EIDDVLLKIAYAQANLLKKELELFHQDSLEPLFIDPVDTVICDLPVGYYP 200
||||||:|||:|||||.:||:|||||||||||.|.|||..:|.|||||||
BPUM_2580___y 142 EIDDVLIKIAWAQANLEEKEVELFHQDSLEPLLISPVDVTVCSLPVGYYP 191
BSNT_04294___ 201 NDEGAEAFELKADEGHSFAHHLFIEQSVKHTKPGGYLFFMIPNHLFESSQ 250
|||.|..:||||.|||:|||:||||||:::||.||:|||:|||.|||..:
BPUM_2580___y 192 NDERAADYELKAKEGHAFAHYLFIEQSLRYTKEGGFLFFIIPNDLFEGKE 241
BSNT_04294___ 251 SGKLKQFFKDKVHINALLQLPKSIFKDEAHAKSILVLQKQGEYTKAPGQI 300
|.:||.|.||:.::|||:|||.|:|||:.||||:.|:||:.|..:||.::
BPUM_2580___y 242 SVQLKDFIKDQAYMNALIQLPVSMFKDKKHAKSLFVMQKKKEGLEAPKRM 291
BSNT_04294___ 301 LLANLPSFSNQKAMLDMMAQFDEWFKKEK---- 329
|.|||||||.:::|:.:|.:.|:||.:||
BPUM_2580___y 292 LFANLPSFSQKESMVSVMRKLDQWFIEEKETKE 324
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