Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04307 and BPUM_2602
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:51
# Commandline: needle
# -asequence pep-align/BSNT_04307.1.24716.seq
# -bsequence pep-align/BPUM_2602___thiI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04307-BPUM_2602___thiI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04307-BPUM_2602___thiI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04307
# 2: BPUM_2602___thiI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 401
# Identity: 291/401 (72.6%)
# Similarity: 355/401 (88.5%)
# Gaps: 0/401 ( 0.0%)
# Score: 1568.0
#
#
#=======================================
BSNT_04307 1 MNYDHILIRFGEISTKGKNRKSFIERLKQNIRLVLKDYPNLKYFSNRDRM 50
|.|||||:|||||||||||||.|||:|:|:||.||||:..|||.|:|||:
BPUM_2602___t 1 MKYDHILVRFGEISTKGKNRKKFIEKLRQHIRFVLKDFVALKYASDRDRI 50
BSNT_04307 51 TITLNGEDPEALFPHLKQVFGIQSFSLAIKCDSRLDDIKATALKAIKDQY 100
||.|||||||.:...||.||||||||||:||::.||.||..||.|:::.|
BPUM_2602___t 51 TIMLNGEDPEPISEQLKGVFGIQSFSLAVKCETNLDAIKEAALTAVQEVY 100
BSNT_04307 101 KPGDTFKVATKRAYKQFELDTNQMNAEIGGHILRNTEGLTVDVRNPDIPL 150
:.|:||||:|||:|||||||:|:||.|||||:|||||.|||:|:.||:.|
BPUM_2602___t 101 EQGNTFKVSTKRSYKQFELDSNEMNREIGGHVLRNTENLTVNVKQPDVHL 150
BSNT_04307 151 RIEIREEATFLTIRDEKGAGGLPVGSAGKAMLMLSGGFDSPVAGFYAMKR 200
||||||:||::|.:|.||||||||||:|:|||||||||||||||:.||||
BPUM_2602___t 151 RIEIREQATYITFKDVKGAGGLPVGSSGRAMLMLSGGFDSPVAGYQAMKR 200
BSNT_04307 201 GLSVEAVHFFSPPYTSERAKQKVMDLAKCLSRFGGSMTLHIVPFTKTQEL 250
|:.:|||||||||||||||||||:||.:||:.:||.:.||||||||.|||
BPUM_2602___t 201 GIQIEAVHFFSPPYTSERAKQKVIDLTECLAAYGGEIKLHIVPFTKIQEL 250
BSNT_04307 251 IQKQIPENYTMTATRRLMLQIADRIREKRNGLAVITGESLGQVASQTLES 300
|.||:|||||||:|||:||:|||:|||||:.||:||||||||||||||||
BPUM_2602___t 251 IHKQVPENYTMTSTRRMMLKIADKIREKRDALAIITGESLGQVASQTLES 300
BSNT_04307 301 MYAINAVTSTPILRPLIAMDKTEIIEKSREIGTYETSIQPFEDCCTIFTP 350
|||||.||:|||:|||||:||.:||:::|.||||||||||||||||||||
BPUM_2602___t 301 MYAINHVTNTPIIRPLIAVDKNDIIDEARRIGTYETSIQPFEDCCTIFTP 350
BSNT_04307 351 PSPKTRPKKEKIEHFESFVDFEPYIQEAVDNIETMTLYSEQEANDKFAEL 400
|||||:||.||:|.:|||.||||.:.|||:.|||:.:.:|::|.|:||:|
BPUM_2602___t 351 PSPKTKPKLEKVERYESFADFEPMLDEAVEQIETIIVKNEKKAADEFADL 400
BSNT_04307 401 F 401
|
BPUM_2602___t 401 F 401
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