Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04364 and BPUM_2640

See DNA alignment / Visit BSNT_04364 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:54
# Commandline: needle
#    -asequence pep-align/BSNT_04364___ytlR.1.24716.seq
#    -bsequence pep-align/BPUM_2640___ytlR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04364___ytlR-BPUM_2640___ytlR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04364___ytlR-BPUM_2640___ytlR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04364___ytlR
# 2: BPUM_2640___ytlR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 310
# Identity:     155/310 (50.0%)
# Similarity:   217/310 (70.0%)
# Gaps:           2/310 ( 0.6%)
# Score: 811.0
# 
#
#=======================================

BSNT_04364___      1 MSHWFFIINPTAGHRNGLRVWKSIQKELIKRKVEHRSFLTEHPGHAEVLA     50
                     |:.|:||:||.|||..|||.|:||:|||.|.::.:|||||:|.|||||||
BPUM_2640___y      1 MNEWYFIVNPAAGHGKGLRTWRSIEKELQKVEISYRSFLTQHEGHAEVLA     50

BSNT_04364___     51 RQISTIQEYKLKRLIVIGGDGTMHEVVNGLKDVDDIELSFVPAGAYNDFS    100
                     ||||.:|:.:||||||||||||:|||:||||::|.::|||||||.:||.:
BPUM_2640___y     51 RQISAMQDDRLKRLIVIGGDGTIHEVLNGLKEMDHVQLSFVPAGHWNDAA    100

BSNT_04364___    101 RGFSIKKIDLIQEIKKVKRPLTRTFHLGSVNFLQDKSQILYFMNHIGIGF    150
                     :|..|.:.|:::|::|.||.||:||.|||.....:.:|.:.|:||||.||
BPUM_2640___y    101 KGLGIHRQDVLKEVRKQKRMLTKTFSLGSFQDHAESAQSVLFLNHIGAGF    150

BSNT_04364___    151 DAYVNKKAMEFPLRRVFLFLRLRFLVYPLSHLHASATFKPFTLACTTEDE    200
                     ||:|.:|.:.|..::....|||.|::||||.||:..:||||.||...|:|
BPUM_2640___y    151 DAHVLRKTVHFRGKKWLKRLRLGFIIYPLSFLHSLWSFKPFDLALFIENE    200

BSNT_04364___    201 TREFHDVWFAVVSNHPFYGGGMKAAPLANPREKTFD-IVIVENQPFLKKY    249
                     .:.|..|||.:|.|||:||||::|||..:.|:..|. :|:.:..|| |..
BPUM_2640___y    201 KKVFRQVWFVIVCNHPYYGGGLEAAPEVSARQPGFQTLVVTDLNPF-KVL    249

BSNT_04364___    250 WLLCLMAFGKHTKMDGVTMFKAKDITFYTKDKIPFHADGEFMGTTPFRLA    299
                     ..|..|.|.||..|.|||:|:.::.......||.||||||.:|.||..:.
BPUM_2640___y    250 LFLSAMVFRKHLGMKGVTLFQHEEAYLEADGKIIFHADGEVIGATPVFVK    299

BSNT_04364___    300 SSPSPLRIKT    309
                     :|...|:::.
BPUM_2640___y    300 ASDRSLKLRA    309


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