Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04375 and BPUM_2648
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:55
# Commandline: needle
# -asequence pep-align/BSNT_04375.1.24716.seq
# -bsequence pep-align/BPUM_2648___rsuA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04375-BPUM_2648___rsuA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04375-BPUM_2648___rsuA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04375
# 2: BPUM_2648___rsuA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity: 165/240 (68.8%)
# Similarity: 194/240 (80.8%)
# Gaps: 3/240 ( 1.2%)
# Score: 831.0
#
#
#=======================================
BSNT_04375 1 MRLDKLLANSGYGSRKEVKAVVKAGAVMIDGKPAKDVKAHVDPDTQEVTV 50
||||||||:||:||||:||.:|||.||.::|:.||.||.||||...||.|
BPUM_2648___r 1 MRLDKLLASSGFGSRKDVKKLVKARAVTVNGELAKQVKDHVDPSNDEVLV 50
BSNT_04375 51 YGEPVDYREFIYLMMNKPQGVLSATEDSRQQTVVDLLTPEEMRFEPFPAG 100
:||.|:|:||||||||||.||:|||||.|.:||||||.||::..||||.|
BPUM_2648___r 51 HGERVEYKEFIYLMMNKPDGVISATEDVRDETVVDLLEPEDIAREPFPVG 100
BSNT_04375 101 RLDKDTEGFLLLTNDGQLAHRLLSPKKHVPKTYEVHLKSQISREDISDLE 150
||||||.|.|||||||||||:|||||||||||||||||..:..:||:.||
BPUM_2648___r 101 RLDKDTVGLLLLTNDGQLAHQLLSPKKHVPKTYEVHLKYPLGDQDINRLE 150
BSNT_04375 151 TGVYIEGGYKTKPARAEIKTNDSGNTVIYLTITEGKYHQVKQMAKAVGNE 200
.||.|...|:||||:.|:..|:|.:|.|.||||||||||||.||:|||||
BPUM_2648___r 151 EGVIILDDYRTKPAKVEVDANESEDTRIRLTITEGKYHQVKLMAQAVGNE 200
BSNT_04375 201 VVYLKRLSMGRVSLDPALAPGEYRELTEEEL-HLLNEPQA 239
|::|||.|||.:|||..||||||||||:||| .|:|.|
BPUM_2648___r 201 VIFLKRRSMGSLSLDEDLAPGEYRELTDEELDSLINRP-- 238
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