Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04395 and BPUM_2666

See DNA alignment / Visit BSNT_04395 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:56
# Commandline: needle
#    -asequence pep-align/BSNT_04395___ytcP.1.24716.seq
#    -bsequence pep-align/BPUM_2666___ytcP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04395___ytcP-BPUM_2666___ytcP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04395___ytcP-BPUM_2666___ytcP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04395___ytcP
# 2: BPUM_2666___ytcP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 293
# Identity:     251/293 (85.7%)
# Similarity:   275/293 (93.9%)
# Gaps:           1/293 ( 0.3%)
# Score: 1286.0
# 
#
#=======================================

BSNT_04395___      1 MGAIAHSLKNRLFDMLIYGFLLMFALICVLPFIHVIAASFATVEEVVSKT     50
                      ..|..|:|.|||::..|.|||||||||||||||||||||||||||::|.
BPUM_2666___y      1 -MNIDRSMKGRLFNLFNYSFLLMFALICVLPFIHVIAASFATVEEVITKK     49

BSNT_04395___     51 FILIPTTFSLDAYRYIFSTDIIYKSLLVSVFVTVIGTAVSMFLSSLMAYG    100
                     |||.||||||:||||||||||:|:||:||:.||::|||||||||||||||
BPUM_2666___y     50 FILFPTTFSLEAYRYIFSTDIVYRSLIVSILVTLVGTAVSMFLSSLMAYG     99

BSNT_04395___    101 LSRRDLIGRQPLMFLVVFTMLFSGGMIPTFLVVKSLGLLDSYWALILPTA    150
                     |||::|.||:.|||||||||||||||||||:|||:|||||:||:||||.|
BPUM_2666___y    100 LSRQELKGRRTLMFLVVFTMLFSGGMIPTFIVVKTLGLLDTYWSLILPVA    149

BSNT_04395___    151 INAFNLIILKNFFQNIPSSLEESAKIDGCNDLGIFFKIVLPLSLPAIATI    200
                     |||||||||||||||||:|||||||:||||||||||||||||||||||||
BPUM_2666___y    150 INAFNLIILKNFFQNIPASLEESAKMDGCNDLGIFFKIVLPLSLPAIATI    199

BSNT_04395___    201 SLFYAVTYWNTYMTAILYLNDSAKWPIQVLLRQIVIVSSGMQGDMSEMGS    250
                     ||||||||||||||||||||||.|||||||||||||||||||||||:|||
BPUM_2666___y    200 SLFYAVTYWNTYMTAILYLNDSVKWPIQVLLRQIVIVSSGMQGDMSDMGS    249

BSNT_04395___    251 GSPPPEQTIKMAVIVVATIPVLLVYPFIQKHFAKGALLGSVKG    293
                     .:|||:||||||||||||||||||||||||||.||||||||||
BPUM_2666___y    250 STPPPDQTIKMAVIVVATIPVLLVYPFIQKHFNKGALLGSVKG    292


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.