Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04396 and BPUM_2667

See DNA alignment / Visit BSNT_04396 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:57
# Commandline: needle
#    -asequence pep-align/BSNT_04396.1.24716.seq
#    -bsequence pep-align/BPUM_2667___ytbQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04396-BPUM_2667___ytbQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04396-BPUM_2667___ytbQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04396
# 2: BPUM_2667___ytbQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 253
# Identity:     143/253 (56.5%)
# Similarity:   192/253 (75.9%)
# Gaps:           4/253 ( 1.6%)
# Score: 753.5
# 
#
#=======================================

BSNT_04396         1 MKKVLIAGGNGVIGRLLAEGLISDYEVTVLDKDHFDGKASSIQADAANYE     50
                      .|:.|.||.|||||:|.:.|.|:||:|::|:.  ......|.|||.|.:
BPUM_2667___y      1 -MKITIIGGCGVIGRILTKALSSEYEITIIDQT--SCLKGVILADATNEQ     47

BSNT_04396        51 ELLKKIPKDTDAILNLLAVKIKYDIMDIAEFEKMTDVFYRASYYLCRAAA    100
                     ||.:.||:|||.|::||.:::.:|:|:..|||||:|:|:|:||.:.|:||
BPUM_2667___y     48 ELYEAIPRDTDVIIHLLNMEMTHDVMNREEFEKMSDIFWRSSYSMFRSAA     97

BSNT_04396       101 EIGIQKLVFASSNHVTDLYEKDGRSLLGREITTSDYPLSKNLYGVLKLSS    150
                     .:||:|::|||||||||.|||||||||||.:||.|.|.:||:||:||.:|
BPUM_2667___y     98 RLGIRKVIFASSNHVTDRYEKDGRSLLGRHMTTDDVPATKNVYGILKFAS    147

BSNT_04396       151 EQIGHLFYLENKLSVINLRIGTVVTDEMDTLHEKERTKKTLLSHPDLLSI    200
                     ||:|.||:.:..:|||||||||||||||:.||||||||:|||||.||:.|
BPUM_2667___y    148 EQLGRLFHDQTGMSVINLRIGTVVTDEMEALHEKERTKRTLLSHEDLVGI    197

BSNT_04396       201 FKAAIETNIRYGTYYAVSDNPGRPWSIESAVNELGFSPQINTAELLNEEE    250
                     .||||||.:.:|||||||:|..:|||.|:...|||:.|..||.|:|.|.:
BPUM_2667___y    198 IKAAIETAVPFGTYYAVSENEEKPWSTENTKQELGYKPHKNTTEILEEND    247

BSNT_04396       251 NGA    253
                     .. 
BPUM_2667___y    248 QA-    249


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