Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04404 and BPUM_2668

See DNA alignment / Visit BSNT_04404 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:57
# Commandline: needle
#    -asequence pep-align/BSNT_04404___ytaP.1.24716.seq
#    -bsequence pep-align/BPUM_2668___ytaP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04404___ytaP-BPUM_2668___ytaP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04404___ytaP-BPUM_2668___ytaP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04404___ytaP
# 2: BPUM_2668___ytaP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     190/309 (61.5%)
# Similarity:   234/309 (75.7%)
# Gaps:          10/309 ( 3.2%)
# Score: 1032.0
# 
#
#=======================================

BSNT_04404___      1 ----------MRAERRKQLFRLLGDLPDRRPISVETLRIEEREENIVETL     40
                               .:..:|:||..|||::|:|..:...||:||:||..:||||
BPUM_2668___y      1 MITKGGVTSMEKESKREQLLSLLGEMPERHRVEAYTLKIEDRESYVVETL     50

BSNT_04404___     41 LLDLNGHEKVPAYFVKPKKTEGPCPAVLFQHSHGGQYDRGKSELIEGADY     90
                     :|.:||.|:|||||||||.|....|.|||||||||.|..||.|||:||.|
BPUM_2668___y     51 ILSINGVEEVPAYFVKPKDTVKKRPVVLFQHSHGGNYVDGKEELIKGAHY    100

BSNT_04404___     91 LKTPSFSDELTSLGYGVLAIDHWGFGDRRGKAESEIFKEMLLTGKVMWGM    140
                     |:..|::.|.||.||.||||||.|||:|||:.||||||||||||||||||
BPUM_2668___y    101 LQETSYAKEFTSKGYSVLAIDHSGFGERRGRTESEIFKEMLLTGKVMWGM    150

BSNT_04404___    141 MIYDSLSALDYMQSRSDVQPDRIGTIGMSMGGLMAWWTAALDDRIKVCVD    190
                     |:|:|:.|:||:.|||||.|||:...|||||||::|||||||:|:.||:|
BPUM_2668___y    151 MLYESMCAIDYVLSRSDVLPDRLAVFGMSMGGLLSWWTAALDERVGVCID    200

BSNT_04404___    191 LCSQVDHHVLIKTQNLDRHGFYYYVPSLAKHFSASEIQSLIAPRPHLSLV    240
                     ||:|||||.||:|.|||||.|||||||||.||:|::||.:|.||||||||
BPUM_2668___y    201 LCAQVDHHTLIETNNLDRHSFYYYVPSLANHFTAADIQEMIFPRPHLSLV    250

BSNT_04404___    241 GVHDRLTPAEGVDKIEKELTAVYAGQGAADCYRVVRSASGHFETAVMRHE    290
                     |..|.|||||||.:|:|.|:..|......:.|::|...:||||||.||||
BPUM_2668___y    251 GKLDPLTPAEGVARIQKRLSQTYQAASLKERYQLVGLHAGHFETATMRHE    300

BSNT_04404___    291 AVRFLQKWL    299
                     |.|||:|||
BPUM_2668___y    301 ATRFLKKWL    309


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