Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04434 and BPUM_2675
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:59
# Commandline: needle
# -asequence pep-align/BSNT_04434___ytrC.1.24716.seq
# -bsequence pep-align/BPUM_2675___ytrC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04434___ytrC-BPUM_2675___ytrC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04434___ytrC-BPUM_2675___ytrC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04434___ytrC
# 2: BPUM_2675___ytrC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity: 142/345 (41.2%)
# Similarity: 212/345 (61.4%)
# Gaps: 32/345 ( 9.3%)
# Score: 685.0
#
#
#=======================================
BSNT_04434___ 1 MVDRGLLYREWKQNQVVILLSIVFLVLANPLTIYHSYSLNEACLAHSDPK 50
||.|.|||:||||:::..:|.::..|...||:....||..:.|: :||.
BPUM_2675___y 1 MVKRQLLYKEWKQSELTFILVMLVAVFTTPLSFLLGYSSFQTCV--NDPT 48
BSNT_04434___ 51 FCT-----FFVDYHIDSLIQINWVIGIILAVCLIGLERSRGTMDFLLGLP 95
|| |:.::..|..|.::|.:|:..|:..:|.||::|.:||.|.||
BPUM_2675___y 49 -CTTVDHYFYYNFSSDIFIALSWTMGLFFAIIQLGYERNKGQIDFTLSLP 97
BSNT_04434___ 96 YKRNQIFQTKFWLGAVVIVFSQLVGFFLAWLLILFLKPEQVNFFEHGSIG 145
:.|:.||.|||:|||.:|....::.:...:||||.::|::...|....:.
BPUM_2675___y 98 FSRSTIFHTKFFLGAGIITLVHVLSYAFTYLLILGIQPKETFDFNSSYLI 147
BSNT_04434___ 146 VMITSIMFYSLVMAAGTLAGNAFAQLLTAFATSVLPYLIIVLPFSNIEII 195
.:::::|.|||.:|||.|.|:|.:|.:..|:||:||||:|.||..:::.|
BPUM_2675___y 148 ALVSTLMIYSLCLAAGALTGSAISQAIVTFSTSILPYLLIWLPMFHLDFI 197
BSNT_04434___ 196 SGVQIWKLFPNIEYYFD--FENNLMDFSPIAYV------DSS----WVAE 233
|.....:.| |::.:|..|||.|: |:| |...
BPUM_2675___y 198 --------FKTDRSWVDASFDHFIMPISPITYITDFKYRDASDYPTWFTG 239
BSNT_04434___ 234 SKYLLLIPAVMSILFYFIGYISFIKHHNERNGYFFLWKTLDRPIQILVIV 283
.:: :||.||.|:||.||..||:||..||||.|||:..:||||||||||
BPUM_2675___y 240 EEF--IIPIVMMIVFYLIGLFSFMKHPIERNGRFFLYSKMDRPIQILVIV 287
BSNT_04434___ 284 LGILGFGIVGHSAGESIAGYIIGMIIGGIVGFLISYFSIFKKVRH 328
.|:||||.||.|:..||.|||:||||||:||.|.|||.|::|.
BPUM_2675___y 288 FGVLGFGWVGFSSDTSILGYIVGMIIGGVVGALTSYFLIYRKR-- 330
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