Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04439 and BPUM_2679

See DNA alignment / Visit BSNT_04439 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:59
# Commandline: needle
#    -asequence pep-align/BSNT_04439___ytzC.1.24716.seq
#    -bsequence pep-align/BPUM_2679___ytzC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04439___ytzC-BPUM_2679___ytzC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04439___ytzC-BPUM_2679___ytzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04439___ytzC
# 2: BPUM_2679___ytzC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 99
# Identity:      49/99 (49.5%)
# Similarity:    64/99 (64.6%)
# Gaps:           9/99 ( 9.1%)
# Score: 238.0
# 
#
#=======================================

BSNT_04439___      1 --------MATRQSVDEHLQQCMQAYDYAEEQLKIASKQEHYNDQEYSDA     42
                             ||||||:||.:|:..:..::|.||..:..:|||||:.|:|.|
BPUM_2679___y      1 MMKWRECRMATRQSIDEFIQKSTETLEFANEQFDLNLRQEHYNEDEFSKA     50

BSNT_04439___     43 QMQLEDAVNALNKLWLSSNDQQREQLYRMRLQLQSLQNNMILQHPLDV-     90
                     |:.||||||.|.||...:||||||:|.|.|:|:|||||.|||....|. 
BPUM_2679___y     51 QLMLEDAVNELEKLKDVANDQQRERLDRARVQIQSLQNQMILGISYDNE     99


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