Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04452 and BPUM_2689

See DNA alignment / Visit BSNT_04452 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:00
# Commandline: needle
#    -asequence pep-align/BSNT_04452___ytmA.1.24716.seq
#    -bsequence pep-align/BPUM_2689___ytmA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04452___ytmA-BPUM_2689___ytmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04452___ytmA-BPUM_2689___ytmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04452___ytmA
# 2: BPUM_2689___ytmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     188/264 (71.2%)
# Similarity:   221/264 (83.7%)
# Gaps:           7/264 ( 2.7%)
# Score: 1018.0
# 
#
#=======================================

BSNT_04452___      1 MIVEKRRFPSPSQHVRLYTICYLSNGLRVKGLLAEPAEPGQYDGFLYLRG     50
                     |||||||||||...:.|:|:.|..:|||:||||||||..|.|||||||||
BPUM_2689___y      1 MIVEKRRFPSPHPQIHLFTVTYEVDGLRIKGLLAEPAGEGHYDGFLYLRG     50

BSNT_04452___     51 GIKSVGMVRPGRIIQFASQGFVVFAPFYRGNQGGEGNEDFAGEDREDAFS    100
                     |||:|||||||||:|||:|||||||||||||||||||||||||||:|||:
BPUM_2689___y     51 GIKNVGMVRPGRIVQFAAQGFVVFAPFYRGNQGGEGNEDFAGEDRKDAFA    100

BSNT_04452___    101 AFRLLQQHPNVKKDRVHIFGFSRGGIMGMLTAIEMGGQAASFVSWGGVSD    150
                     ||:||:.|..||:||:||||||||||||:.||:||..:|||||:||||||
BPUM_2689___y    101 AFQLLKHHKKVKQDRIHIFGFSRGGIMGIWTAVEMKQEAASFVTWGGVSD    150

BSNT_04452___    151 MILTYEERQDLRRMMKRVIGGTPKKVPEEYQWRTPFDQVNKIQAPVLLIH    200
                     |.||||||.|:||||||||||.|.||||.|:.|||.:.|:||:||||:||
BPUM_2689___y    151 MKLTYEERVDMRRMMKRVIGGPPHKVPEAYEDRTPLNDVDKIEAPVLIIH    200

BSNT_04452___    201 GEKDQNVSIQHSYLLEEKLKQLHKPVETWYYSTFTHYFPPKENRRIVRQL    250
                     ||:||||||:|:||||:.|:|..|.|||||:....|||||:.||.|||:|
BPUM_2689___y    201 GEEDQNVSIEHAYLLEDALRQHGKSVETWYFHGRNHYFPPRHNREIVRRL    250

BSNT_04452___    251 TQWMKNR-------    257
                     |.||.:|       
BPUM_2689___y    251 TTWMLSRKSENVVK    264


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