Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05887 and BPUM_2720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:27
# Commandline: needle
# -asequence pep-align/BSNT_05887___menA.1.24716.seq
# -bsequence pep-align/BPUM_2720___menA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05887___menA-BPUM_2720___menA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05887___menA-BPUM_2720___menA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05887___menA
# 2: BPUM_2720___menA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity: 175/312 (56.1%)
# Similarity: 227/312 (72.8%)
# Gaps: 18/312 ( 5.8%)
# Score: 914.0
#
#
#=======================================
BSNT_05887___ 1 -----------------MGQILWQLTRPHTLTASFVPVLLGTVLAMFYVK 33
..:|.|.|.|||||||:|:||.||||||:...:
BPUM_2720___m 1 MQHQSISDQLSPIKPDKNWRIWWNLLRPHTLTAAFIPVTLGTVLALPSGQ 50
BSNT_05887___ 34 VDLLLFLAMLFSCLWIQIATNLFNEYYDFKRGLDTAESVGIGGAIVRHGM 83
:.:.|||||||:.::||||||:||||:||.||||..:||||||||||:|:
BPUM_2720___m 51 IHVGLFLAMLFASMFIQIATNMFNEYFDFVRGLDNEKSVGIGGAIVRNGV 100
BSNT_05887___ 84 KPKTILQLALASYGIAILLGVYICASSSWWLALIGLVGMAIGYLYTGGPL 133
||||:|.||.|.:.:::|||||||..||||:|||||:.||.||.|||||:
BPUM_2720___m 101 KPKTVLGLAYALFALSLLLGVYICMMSSWWIALIGLICMAAGYFYTGGPV 150
BSNT_05887___ 134 PIAYTPFGELFSGICMGSVFVLISFFIQTDMINTQSILISIPIAILVGAI 183
||||||||||.||..||...:||||:|||..:.::::|:|:||:||||||
BPUM_2720___m 151 PIAYTPFGELVSGAFMGLGIILISFYIQTGTLTSKAVLVSLPISILVGAI 200
BSNT_05887___ 184 NLSNNIRDIEEDKKGGRKTLAILMGHKGAVTLLAASFAVAYIWVVGLVIT 233
.|||||||::.||:.||||||||.|.|.||.:|.:.|.::|:.:...:.|
BPUM_2720___m 201 LLSNNIRDLDGDKENGRKTLAILAGRKAAVNILLSMFLISYVLIFVYIFT 250
BSNT_05887___ 234 GAASPWLFVVFLSVPKPVQAVKGFVQKEMPMNMIVAMKSTAQTNTFFGFL 283
.....|..:|.|||||...|:|.|.|||.|:.::.|||||||||||||||
BPUM_2720___m 251 DIVGLWSLLVLLSVPKAYTAIKEFKQKEKPIELMNAMKSTAQTNTFFGFL 300
BSNT_05887___ 284 LSIGLLISYFR- 294
|:|.|::.|:.
BPUM_2720___m 301 LTIALILQYYIA 312
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