Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04488 and BPUM_2722

See DNA alignment / Visit BSNT_04488 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:03
# Commandline: needle
#    -asequence pep-align/BSNT_04488___yteA.1.24716.seq
#    -bsequence pep-align/BPUM_2722___dksA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04488___yteA-BPUM_2722___dksA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04488___yteA-BPUM_2722___dksA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04488___yteA
# 2: BPUM_2722___dksA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     129/252 (51.2%)
# Similarity:   162/252 (64.3%)
# Gaps:          22/252 ( 8.7%)
# Score: 629.5
# 
#
#=======================================

BSNT_04488___      1 MLTKEQLQHLKNELEQTKKDILNRFKDNDHFQLNSAFPYDSWGELSAYDN     50
                      ::|::|.|||..|...|.::..:..|::.   ..:|||||.|:||||||
BPUM_2722___d      1 -MSKDELHHLKQRLLDEKHELEAKSHDDEQ---KVSFPYDSVGDLSAYDN     46

BSNT_04488___     51 HPGDQATELYEREKDIALDLHEREHLRDIEHSLKAIENGTYGICEVSGKE    100
                     |||||.|||:||.|||||:..|.|||.||..:|:||.:|:||.|:|....
BPUM_2722___d     47 HPGDQGTELFERGKDIALNSLEHEHLLDINEALQAITDGSYGQCKVCKAP     96

BSNT_04488___    101 IPFERLEALPTATTLAEYSSQDVVSKDRPIEEE---TPFGQFEFDDDEEI    147
                     ||.|||||||:|.|..|:|.:..||::|||||:   .|.||||    .|.
BPUM_2722___d     97 IPKERLEALPSAVTCTEHSKEQTVSQNRPIEEDLLSPPSGQFE----NEE    142

BSNT_04488___    148 RAPYDSEDSYQDVEKYGNSQTPQDMENPPLSYDDMTMNAEENIGNTESYE    197
                     .|.||.||:|||||:||||.||.|||.|||:|||:...:|:. ...|.||
BPUM_2722___d    143 SAAYDGEDAYQDVERYGNSDTPSDMEFPPLTYDDVYTQSEDE-DYVEDYE    191

BSNT_04488___    198 NFIATDITGKEITVYQSRAHERYEEELDEEGIMTTFGDLHAD--------    239
                     .|.|.||.||...||.::|||.|||.|||||:||.||||...        
BPUM_2722___d    192 GFAAADIEGKASKVYPNKAHEAYEEALDEEGVMTVFGDLKPYEEEPYTEE    241

BSNT_04488___    239 --    239
                       
BPUM_2722___d    242 NH    243


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