Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04560 and BPUM_2732
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:04
# Commandline: needle
# -asequence pep-align/BSNT_04560___yuaF.1.24716.seq
# -bsequence pep-align/BPUM_2732___yuaF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04560___yuaF-BPUM_2732___yuaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04560___yuaF-BPUM_2732___yuaF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04560___yuaF
# 2: BPUM_2732___yuaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 105/193 (54.4%)
# Similarity: 137/193 (71.0%)
# Gaps: 19/193 ( 9.8%)
# Score: 524.5
#
#
#=======================================
BSNT_04560___ 1 MVTAAVHQCIDEERMRKLELFGVPIQTIYLYTLIIAGSLTLLFLFFGDVF 50
:::||:|:||:|||.|:|:|.|||:|:||||||
BPUM_2732___y 1 -----------------MDVFGLPLQTLYLYILMISGILTLVFVFFGDVF 33
BSNT_04560___ 51 AGLSEGI--PFLNPTLVLSFFTCFSAGGYIGELVLPLSSLLIALLSCILS 98
.||.|.| |||.|||:|:|.|.|||||:|.|....:.|.|.|:||.:|:
BPUM_2732___y 34 DGLFEAIPVPFLQPTLILAFLTFFSAGGFISEKTAIVGSGLGAVLSAVLA 83
BSNT_04560___ 99 IMLVVLLHIFVLVPLSSAEESLAYREDDLRGRLGKVITAVPVDGFGEVVI 148
::||..|::|||||||||||||:|.|.||:||.|::|.:||.||||||::
BPUM_2732___y 84 VVLVTCLNVFVLVPLSSAEESLSYTEADLKGRTGEIIVSVPKDGFGEVLL 133
BSNT_04560___ 149 EGIGGTISKSAVSFDNQQISYGTTVLVVDINNGVLSVTPHEPI 191
....|.|||.|||||.::|.|||.||||::|.|||||.|.|.|
BPUM_2732___y 134 ISNSGKISKPAVSFDEEEIPYGTRVLVVEVNKGVLSVIPDEEI 176
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