Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00498 and BPUM_2738
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:19
# Commandline: needle
# -asequence pep-align/BSNT_00498.1.24716.seq
# -bsequence pep-align/BPUM_2738.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00498-BPUM_2738.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00498-BPUM_2738.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00498
# 2: BPUM_2738
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity: 68/282 (24.1%)
# Similarity: 86/282 (30.5%)
# Gaps: 159/282 (56.4%)
# Score: 333.0
#
#
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BSNT_00498 1 ---------------MPVPSDLHPIVKQNADALKAAAANKGITVVITEGF 35
..:.|.:|.|||::|..:...|..:||.|.||.|:
BPUM_2738 1 MAEKIGLQTLIDRSIRNMGSGIHKIVKESAIEMIKQAYKEGIFVQITSGY 50
BSNT_00498 36 RSFKEQDELYKQGRTKKGNIVTYARGGESYHNYGLAIDFALQKKDG-SII 84
|||.||::||.||||..|.|||.|:||:|.||||||||:.|...|| ..:
BPUM_2738 51 RSFAEQNKLYAQGRTAPGKIVTNAKGGQSNHNYGLAIDYVLLSADGKKAL 100
BSNT_00498 85 WDMEYDGNQNGKSDWLEVVEIAKTLGFEWGGDWKRFKDYPHLEMIPN--- 131
|.: |.| |..|.:|.|:|||.||||||.|||||||||:.:
BPUM_2738 101 WTV------NEK--WRRVAQIGKSLGFSWGGDWKSFKDYPHLEMMGSLTL 142
BSNT_00498 131 -------------------------------------------------- 131
BPUM_2738 143 TQLQAGKRPFLVSFLSNKVSEKPIKTKPLEKLLENGSIKSKTSTSEKSVI 192
BSNT_00498 131 -------------------------------------------------- 131
BPUM_2738 193 LPSGILKITKPLTKGSQVTAVQKALSSLYFYPDKGAKNNGIDGYYGPKTA 242
BSNT_00498 131 -------------------------------- 131
BPUM_2738 243 NAVKRFQLMNGLAADGIYGPKTRNKMEQLLKK 274
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