Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04597 and BPUM_2788
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:15
# Commandline: needle
# -asequence pep-align/BSNT_04597.1.24716.seq
# -bsequence pep-align/BPUM_2788.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04597-BPUM_2788.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04597-BPUM_2788.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04597
# 2: BPUM_2788
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 662
# Identity: 281/662 (42.4%)
# Similarity: 383/662 (57.9%)
# Gaps: 158/662 (23.9%)
# Score: 1369.5
#
#
#=======================================
BSNT_04597 0 -------------------------------------------------- 0
BPUM_2788 1 MKKINFFKHFTMSKKLITAFLAILLVPILVLAAFSYEVASKSLNDEIMSS 50
BSNT_04597 0 -------------------------------------------------- 0
BPUM_2788 51 AANGVQQLNELINKDVQPKIDIVSYLSKSVKKSELTSKNKDLLKVKLEQL 100
BSNT_04597 1 --------------------------MPSDFNALERDWYKEAMANKGKTI 24
..|..:|....|::::|.:| |.|
BPUM_2788 101 SETDEEIVEVFIADQNGKLTKYSEIHKDSAASAKNEPWFQQSMGDK-KLI 149
BSNT_04597 25 VTEPYESISSGKMVVTIARQTVDGSGVVAIDMKIDDLVTTAKGINIGKEG 74
:::|:...||..:::||:.|..|||||:.|:|:::.::..|..|.|||||
BPUM_2788 150 ISDPFVDKSSDDLLITISEQLADGSGVIGINMRLNTIIKDANSIKIGKEG 199
BSNT_04597 75 YAFILSQNKKVIAYSGEKAGTELKGDWVDKLYKDKSGDFEYTYKGKKKKM 124
|||:.:.::..||:..:|.|.:|.||::.|||..|.|.|:|.|.|:.|:|
BPUM_2788 200 YAFVATPDQHYIAHKTDKPGEKLTGDFITKLYDKKQGSFKYEYNGQPKQM 249
BSNT_04597 125 AFATSETTGWKISGTMYANEIHDAASRVLIMASIVLAIAIAAGMTAIYFV 174
.|.|:|:||||::||||..||.:||..||.:..|:||:|||.|..||||:
BPUM_2788 250 FFDTNESTGWKLAGTMYVGEIQEAAQPVLDLTMIILAVAIAIGGIAIYFI 299
BSNT_04597 175 IRSITKPLRRIVASAEKISEGDLTETIEINSKDELGVLSESFNHMAHSLR 224
|:||.|||..:..||||||:||||:.||:.:.||:|.|::|||.|:..|:
BPUM_2788 300 IKSIRKPLIALSESAEKISQGDLTQHIEVRTHDEIGKLAQSFNDMSAKLK 349
BSNT_04597 225 SLIHGIKDSVEHVASSSEELTASADQTSRATEHITMAIEQFSNGSESQSE 274
.:|..:::|:|:||:|||||||||.||::||||||.:||||||.:|.|::
BPUM_2788 350 QVIQAVQNSIENVAASSEELTASAGQTAQATEHITSSIEQFSNSNEHQND 399
BSNT_04597 275 KIETTTEQINEMNDGLAEL----------------------------ARQ 296
.||.::.|:|||:..|:.: |.|
BPUM_2788 400 MIEKSSVQLNEMDRSLSHMVNTTSHMMESSIDSSKTAQAGGELVQKTAGQ 449
BSNT_04597 297 MNTIDHSVKAAEQVVKGLEIKSKDITNILRVINGIADQTNLLALNAAIEA 346
|.||:.:||.||.|::|||.|||||||||.||||||||||||||||||||
BPUM_2788 450 MQTIEQAVKEAELVIQGLEQKSKDITNILGVINGIADQTNLLALNAAIEA 499
BSNT_04597 347 ARAGEYGRGFSVVAEEVRKLAVQSADSAKEIESLISEIVKEIHTSLNVLQ 396
|||||.|||||||||||||||.||..|:||||||.:|||:||..|.|:.:
BPUM_2788 500 ARAGEAGRGFSVVAEEVRKLAEQSGSSSKEIESLTNEIVEEIEKSQNMFK 549
BSNT_04597 397 SVNKEVETGLVMTDETKQSFKHISQMTNQIASELQNMNATVEELSAGAQE 446
.|..||::||.:|||||.||:.|:..|:::..:::.||.|.:|||.|:.:
BPUM_2788 550 QVAGEVQSGLNITDETKISFEKITDKTSEMTEQMKQMNGTAKELSHGSND 599
BSNT_04597 447 ISAASNDITAISKESSDGIQDIAASAEEQLASMEEISSSALTLERMSEEL 496
||.|.|.|..:|:|||.|.||||||||||||||||||||:.||.:|:|||
BPUM_2788 600 ISHAVNQIKELSRESSAGFQDIAASAEEQLASMEEISSSSATLSQMAEEL 649
BSNT_04597 497 RDLTKQFKVDRQ 508
|:|.||||:
BPUM_2788 650 RELIKQFKI--- 658
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