Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04634 and BPUM_2812
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:21
# Commandline: needle
# -asequence pep-align/BSNT_04634___kinB.1.24716.seq
# -bsequence pep-align/BPUM_2812.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04634___kinB-BPUM_2812.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04634___kinB-BPUM_2812.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04634___kinB
# 2: BPUM_2812
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 435
# Identity: 219/435 (50.3%)
# Similarity: 288/435 (66.2%)
# Gaps: 12/435 ( 2.8%)
# Score: 1056.5
#
#
#=======================================
BSNT_04634___ 1 MEILKDYLLHICFILFPILLYQVFWLGKPAILVPKINSGLVTLFACGASV 50
||:.||:|||:.||||||.||...||.:.....||.|..|||:||..:|.
BPUM_2812 1 MEMFKDFLLHVSFILFPIFLYHALWLSRTPAHFPKTNKLLVTVFASISSA 50
BSNT_04634___ 51 LCIIFPIHEMDYIQYGLQMIPVIICLFYISTASGLTVAASVLCFELLFYE 100
|||::|:..:..:|.|||.||:::.:.|....:|:.........:.:.|.
BPUM_2812 51 LCIMYPVGSILDLQTGLQSIPLVLAILYGGYTAGIVAILISSMVKFVMYG 100
BSNT_04634___ 101 PSAMFVFTLLPFLIIIPILFQKKWPFMSKAKKLLLSLLISCVEIFLFFAS 150
........::|....||.||.:||...||.|||:..:||...:.|..:..
BPUM_2812 101 SFLWVGLIVVPIYFFIPFLFYRKWRQYSKLKKLMYGVLIGLSKGFFIYIG 150
BSNT_04634___ 151 SWILSALNILNFQKSGIFVYEAAVSGLFRSSV-----LLLSIYIIESIAE 195
|.|::::.: |..|:.:..:..||.|:: |:||||.||.:.|
BPUM_2812 151 ---LFAVSLMEY--SPAFIMQQKLLELFFSTLYYIFFLVLSIYSIEFVKE 195
BSNT_04634___ 196 NIALRSQLIHSEKMTIVSELAASVAHEVRNPLTVVRGFVQLLFNDE-TLQ 244
|..:|:||:.|||:||||||||||||||||||||||||:||||:.| |.:
BPUM_2812 196 NAQMRTQLVQSEKLTIVSELAASVAHEVRNPLTVVRGFIQLLFSSENTKE 245
BSNT_04634___ 245 NKSSADYKKLVLSELDRAQGIITNYLDMAKQQLYEKEVFDLSALIKETSS 294
..::.|||.||||||||||.|||:|||:|||..|:.|..:||.|::|.:|
BPUM_2812 246 PAANKDYKNLVLSELDRAQDIITSYLDIAKQNYYQIESLNLSKLLEECAS 295
BSNT_04634___ 295 LMVSYANYKSVTVEAETEPELLIYGDATKLKQAVINLMKNSIEAVPHGKG 344
||.||||:||||:....||:|.|.||.||:||.:|||:||:|||.|..:|
BPUM_2812 296 LMTSYANFKSVTIHQSIEPDLYIQGDETKIKQVMINLIKNAIEAAPEHEG 345
BSNT_04634___ 345 MIHISAKRNGHTIMINITDNGVGMTDHQMQKLGEPYYSLKTNGTGLGLTV 394
.|.:.|.:..|.|.|...|||||||:.||:|||||||:||..||||||||
BPUM_2812 346 KIELFASKENHKICIYFVDNGVGMTESQMKKLGEPYYTLKNKGTGLGLTV 395
BSNT_04634___ 395 TFSIIEHHHGTISFNSSFQKGTTVTIKLPADLPH- 428
||||||:|||||.|.||.|.|||||:|.|.|...
BPUM_2812 396 TFSIIENHHGTIRFKSSLQSGTTVTVKFPEDTRRK 430
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