Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04692 and BPUM_2858
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:29
# Commandline: needle
# -asequence pep-align/BSNT_04692___yukC.1.24716.seq
# -bsequence pep-align/BPUM_2858.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04692___yukC-BPUM_2858.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04692___yukC-BPUM_2858.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04692___yukC
# 2: BPUM_2858
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 454
# Identity: 230/454 (50.7%)
# Similarity: 313/454 (68.9%)
# Gaps: 19/454 ( 4.2%)
# Score: 1123.5
#
#
#=======================================
BSNT_04692___ 1 MSGKQKSYLENQLEAVAEKTDAGYTFTFQREKIKLLDGLEANVIKDINPF 50
|:.|:.||||.|||||.:|....|:|.||||.|||||||||..||||||.
BPUM_2858 1 MADKKSSYLEEQLEAVMKKEGGTYSFIFQRETIKLLDGLEAAPIKDINPS 50
BSNT_04692___ 51 FYKEIDVTDDEVIITIQPPSSYKAFRFMKAKDKKSKWQFAYQLVQAVQQH 100
|.|||.:|:|||:|:||||.:|:.|||:.|||:||||.|:||||.||.:|
BPUM_2858 51 FKKEIQLTEDEVMISIQPPPAYQEFRFIHAKDEKSKWIFSYQLVDAVCKH 100
BSNT_04692___ 101 NLSRLNLIVAPENIVFDKGLTPYFLHYGVKESIPPYERDEERVWQELKAA 150
::.||:.||:||||||.:||.|.||||||||||||||.||:|:.:|:||.
BPUM_2858 101 DVKRLHPIVSPENIVFHQGLAPAFLHYGVKESIPPYETDEQRLLKEVKAV 150
BSNT_04692___ 151 AALAVDGAFAFEDYLKFNETLTFSAEAKAILDTESYDDLLELIQIHIDEL 200
....||..:.|::|:.::|||..|..||.|.:|:|.::|..|||..|:.:
BPUM_2858 151 ILRVVDHEYQFQEYVAYSETLKLSELAKEISETQSLEELSALIQQKIEAI 200
BSNT_04692___ 201 EAKAKTYIHIPRKKWNIQRYIGLGLIVLLVPALIYSMYALFFAQPKHQAI 250
|.|.||.:.||:|||.|:|||||||:|||:|||:|::|..|||.||.:|.
BPUM_2858 201 ETKEKTLLTIPKKKWKIERYIGLGLLVLLIPALVYTIYTFFFAMPKQEAY 250
BSNT_04692___ 251 VDSNRAFLNKQYSEVISTLSKYEAESLPESVQYQLATSYVEVE--NLGSA 298
|::|:.:||||||:|:.||.||.|..:|.|:||:||.|||:.. ||...
BPUM_2858 251 VEANKYYLNKQYSQVVDTLEKYSANQMPVSLQYELAISYVQTNQGNLLLD 300
BSNT_04692___ 299 KTKNIENNLVTLQSDPQHFLYWIDYGRGEYKEAISIGRKLEYNDYIYFAL 348
:.|....:..|||:|||:||:||..|:|..|||:.|.|.|..:.||:.||
BPUM_2858 301 QHKKEITDTYTLQTDPQYFLFWIHIGQGNSKEALDIARVLGDDRYIFTAL 350
BSNT_04692___ 349 AKYKQQLLSEDT-NDEDIQKELDSVNSELEKAQKERQENKQSNSETSLVD 397
..|:..:.::|: :.|:.||:||.:..|: |..|.:| .:|||..|
BPUM_2858 351 VAYRNDIQNDDSLSAEEKQKQLDPIIKEM--ANYEEKE----TTETSTND 394
BSNT_04692___ 398 TSEEQTQTDEEKQAEEKAAEEKAAAEEKAKKEEQKKKEDEKKETEKKDEK 447
:|...:|||| |.|:..:.||..|:|.|:.|.|||..:.|:.|||
BPUM_2858 395 SSGGASQTDE---AAEQKEQSKADQEKKEKESEVKKKTSQTKKDEKK--- 438
BSNT_04692___ 448 KDDK 451
BPUM_2858 438 ---- 438
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