Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04721 and BPUM_2870

See DNA alignment / Visit BSNT_04721 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:31
# Commandline: needle
#    -asequence pep-align/BSNT_04721___yuiB.1.24716.seq
#    -bsequence pep-align/BPUM_2870.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04721___yuiB-BPUM_2870.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04721___yuiB-BPUM_2870.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04721___yuiB
# 2: BPUM_2870
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 106
# Identity:      79/106 (74.5%)
# Similarity:    96/106 (90.6%)
# Gaps:           0/106 ( 0.0%)
# Score: 417.0
# 
#
#=======================================

BSNT_04721___      1 MISLPVVIISIVLFFVLFFGIGFLLNMLLRMSWIMAVIYPIVCLFIISKD     50
                     ||||||||||::||||||||||||||||||||||||::|||||||||:..
BPUM_2870          1 MISLPVVIISVILFFVLFFGIGFLLNMLLRMSWIMAILYPIVCLFIINNQ     50

BSNT_04721___     51 KLISYVQSPGESFASLFHRVLSLAAADVLILVSGLAGAIVSGIAINMLRK    100
                     |:|:||:.||.:|:.:..|::||||||::||:|||.||||||:.||.|||
BPUM_2870         51 KMIAYVREPGIAFSGIGDRIVSLAAADIIILLSGLIGAIVSGLVINALRK    100

BSNT_04721___    101 RGYQMF    106
                     ||||||
BPUM_2870        101 RGYQMF    106


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