Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04845 and BPUM_2927

See DNA alignment / Visit BSNT_04845 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:35
# Commandline: needle
#    -asequence pep-align/BSNT_04845___yurY.1.24716.seq
#    -bsequence pep-align/BPUM_2927___sufC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04845___yurY-BPUM_2927___sufC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04845___yurY-BPUM_2927___sufC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04845___yurY
# 2: BPUM_2927___sufC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     250/261 (95.8%)
# Similarity:   256/261 (98.1%)
# Gaps:           0/261 ( 0.0%)
# Score: 1274.0
# 
#
#=======================================

BSNT_04845___      1 MAASTLTIKDLHVEIEGKEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAA     50
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2927___s      1 MTASTLTIKDLHVEIEGKEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAA     50

BSNT_04845___     51 IMGHPKYEVTKGSITLDGKDVLEMEVDERAQAGLFLAMQYPSEISGVTNA    100
                     ||||||||||||||.|||:|||||||||||||||||||||||||||||||
BPUM_2927___s     51 IMGHPKYEVTKGSILLDGEDVLEMEVDERAQAGLFLAMQYPSEISGVTNA    100

BSNT_04845___    101 DFLRSAINARREEGDEISLMKFIRKMDENMEFLEMDPEMAQRYLNEGFSG    150
                     |||||||||||||||||||||||||||||||||||||:||||||||||||
BPUM_2927___s    101 DFLRSAINARREEGDEISLMKFIRKMDENMEFLEMDPDMAQRYLNEGFSG    150

BSNT_04845___    151 GEKKRNEILQLMMIEPKIAILDEIDSGLDIDALKVVSKGINKMRSENFGC    200
                     |||||||||||||||||||||||||||||||||||||||||:||.|:|||
BPUM_2927___s    151 GEKKRNEILQLMMIEPKIAILDEIDSGLDIDALKVVSKGINRMRGESFGC    200

BSNT_04845___    201 LMITHYQRLLNYITPDVVHVMMQGRVVKSGGAELAQRLEAEGYDWIKQEL    250
                     ||||||||||||||||.||||||||:|||||.|||||||||||||||:||
BPUM_2927___s    201 LMITHYQRLLNYITPDHVHVMMQGRIVKSGGPELAQRLEAEGYDWIKKEL    250

BSNT_04845___    251 GIEDETVGQEA    261
                     |||||||||||
BPUM_2927___s    251 GIEDETVGQEA    261


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