Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04887 and BPUM_2949

See DNA alignment / Visit BSNT_04887 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:37
# Commandline: needle
#    -asequence pep-align/BSNT_04887___yusV.1.24716.seq
#    -bsequence pep-align/BPUM_2949.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04887___yusV-BPUM_2949.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04887___yusV-BPUM_2949.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04887___yusV
# 2: BPUM_2949
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     241/298 (80.9%)
# Similarity:   255/298 (85.6%)
# Gaps:          25/298 ( 8.4%)
# Score: 1254.0
# 
#
#=======================================

BSNT_04887___      1 MYIENVQYIVLLKSQQKGAVMGMSAISTETLSLGYGDAVIIDELNLTIPK     50
                                           |||||||.||||||:.:||||||::|||
BPUM_2949          1 ----------------------MSAISTEGLSLGYGETMIIDELNVSIPK     28

BSNT_04887___     51 GEITVFIGSNGCGKSTLLRSLARLMKPRGGSVLLEGRAIAKLPTKEVAKE    100
                     |||||||||||||||||||||||||||.||||||||.:|||||||||||:
BPUM_2949         29 GEITVFIGSNGCGKSTLLRSLARLMKPMGGSVLLEGHSIAKLPTKEVAKQ     78

BSNT_04887___    101 LAILPQGPSAPEGLTVHQLVKQGRYPYQNWLKQWSKEDEEAVERALKATK    150
                     ||||||||.|||||||||||||||||||||||||||:|||||.||||:||
BPUM_2949         79 LAILPQGPEAPEGLTVHQLVKQGRYPYQNWLKQWSKQDEEAVNRALKSTK    128

BSNT_04887___    151 LEDMADRAVDSLSGGQRQRAWIAMTLAQETDIILLDEPTTYLDMTHQIEI    200
                     :||:|||.||||||||||||||||||||||||||||||||||||||||||
BPUM_2949        129 MEDLADRTVDSLSGGQRQRAWIAMTLAQETDIILLDEPTTYLDMTHQIEI    178

BSNT_04887___    201 LDLLFELNEKEGRTIVMVLHDLNLACRYAHHLVAIKDKRIYAEGRPEEVI    250
                     |||||:|||||.||||||||||||||||||||||||||.||||||||.||
BPUM_2949        179 LDLLFDLNEKEQRTIVMVLHDLNLACRYAHHLVAIKDKTIYAEGRPETVI    228

BSNT_04887___    251 TCDLVQNVFSMNCQVTQDPLFGTPLCIPHGRGRCIVQEAAFTSHG---    295
                     .||||:|||.||||||.||||||||||||||||||||:|...:..   
BPUM_2949        229 NCDLVKNVFDMNCQVTTDPLFGTPLCIPHGRGRCIVQQAQAETFLAAR    276


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