Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04964 and BPUM_2990
See
DNA alignment /
Visit
BSNT_04964 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence pep-align/BSNT_04964___fhuC.1.24716.seq
# -bsequence pep-align/BPUM_2990___fhuC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04964___fhuC-BPUM_2990___fhuC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04964___fhuC-BPUM_2990___fhuC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04964___fhuC
# 2: BPUM_2990___fhuC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity: 217/271 (80.1%)
# Similarity: 246/271 (90.8%)
# Gaps: 2/271 ( 0.7%)
# Score: 1131.0
#
#
#=======================================
BSNT_04964___ 1 MNSLSTEQLGIGYGDRVIVEDLNISIPKGKITTLIGPNGCGKSTILKTMS 50
|.||.||:|.|||.||:|||||||||||||:|||||||||||||||||||
BPUM_2990___f 1 MKSLETEKLCIGYQDRLIVEDLNISIPKGKVTTLIGPNGCGKSTILKTMS 50
BSNT_04964___ 51 RIMRSHAGAVYLNGKAIHKMSTKDIAKDMAILPQTPEAPSGLTVHELVSY 100
|||:|:.|||||||:|||:..||:|:|.||||||||||||||||:|||||
BPUM_2990___f 51 RIMKSNRGAVYLNGQAIHQTPTKEISKQMAILPQTPEAPSGLTVYELVSY 100
BSNT_04964___ 101 GRFPHQSGFGRLNDEDRRIIKWALEETGMAEYAERPIEALSGGQRQRVWI 150
||||||:|||||::||:|||:||||||||..:.:||||||||||||||||
BPUM_2990___f 101 GRFPHQNGFGRLSNEDKRIIRWALEETGMIAFHDRPIEALSGGQRQRVWI 150
BSNT_04964___ 151 AMALAQGTELLLLDEPTTYLDLAHQLEILQLLDRLNKEQGRTILMVIHDL 200
||||||.|||||||||||||||||||||||||:|||:|||||:|||||||
BPUM_2990___f 151 AMALAQETELLLLDEPTTYLDLAHQLEILQLLERLNREQGRTVLMVIHDL 200
BSNT_04964___ 201 NHAARFSHYMIALKKGTVIKEGTALEVMTPDILKQVFQIDAEIVTDPRTN 250
|||||||||||||.:|.|||:||..||||.::|.|||.||||||.|||||
BPUM_2990___f 201 NHAARFSHYMIALNQGKVIKDGTPHEVMTKEVLGQVFHIDAEIVLDPRTN 250
BSNT_04964___ 251 KPVCLTYDLIKNEKELVTV-- 269
||:||||||:.:|::|..|
BPUM_2990___f 251 KPICLTYDLMNHERKLEAVNG 271
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.